Related papers: The m-th Longest Runs of Multivariate Random Seque…
We determine the average number of distinct subsequences in a random binary string, and derive an estimate for the average number of distinct subsequences of a particular length.
Finding the common subsequences of $L$ multiple strings has many applications in the area of bioinformatics, computational linguistics, and information retrieval. A well-known result states that finding a Longest Common Subsequence (LCS)…
Considering the optimal alignment of two i.i.d. random sequences of length $n$, we show that when the scoring function is chosen randomly, almost surely the empirical distribution of aligned letter pairs in all optimal alignments converges…
Random residue sequences (RR) may be used in many random number applications including those related to multiple access in communications. This paper investigates variations on an algorithm to generate RR sequences that was proposed earlier…
Let $X_1, X_2, ..., X_n, ... $ be a sequence of iid random variables with values in a finite alphabet $\{1,...,m\}$. Let $LI_n$ be the length of the longest increasing subsequence of $X_1, X_2, ..., X_n.$ We express the limiting…
We study the space requirements of a sorting algorithm where only items that at the end will be adjacent are kept together. This is equivalent to the following combinatorial problem: Consider a string of fixed length n that starts as a…
Imagine a sequence in which the first letter comes from a binary alphabet, the second letter can be chosen on an alphabet with 10 elements, the third letter can be chosen on an alphabet with 3 elements and so on. When such a sequence can be…
The cornerstone of any algorithm computing all repetitions in a string of length n in O(n) time is the fact that the number of runs (or maximal repetitions) is O(n). We give a simple proof of this result. As a consequence of our approach,…
Considered is the distribution of the crosscorrelation between $m$-sequences of length $2^m-1$, where $m=2k$, and $m$-sequences of shorter length $2^k-1$. New pairs of $m$-sequences with three-valued crosscorrelation are found and the…
We study the length of $T$-contaminated runs of heads in the well-known coin tossing experiment. A $T$-contaminated run of heads is a sequence of consecutive heads interrupted by $T$ tails. For $T=1$ and $T=2$ we find the asymptotic…
A run is a maximal occurrence of a repetition $v$ with a period $p$ such that $2p \le |v|$. The maximal number of runs in a string of length $n$ was studied by several authors and it is known to be between $0.944 n$ and $1.029 n$. We…
We provide upper and lower bounds for the expected length $\mathbb E(L_{n,m})$ of the longest common pattern contained in $m$ random permutations of length $n$. We also address the tightness of the concentration of $L_{n,m}$ around $\mathbb…
Given several number sequences, determining the longest common subsequence is a classical problem in computer science. This problem has applications in bioinformatics, especially determining transposable genes. Nevertheless, related works…
This paper presents a sharp approximation of the density of long runs of a random walk conditioned on its end value or by an average of a functions of its summands as their number tends to infinity. The conditioning event is of moderate or…
The work takes another look at the number of runs that a string might contain and provides an alternative proof for the bound. We also propose another stronger conjecture that states that, for a fixed order on the alphabet, within every…
We establish new upper bounds for the length of runs of consecutive positive integers each with exactly $k$ divisors, where $k$ is a given positive integer of some special forms. Also we have found exact values of the maximum possible runs…
Given two random finite sequences from $[k]^n$ such that a prefix of the first sequence is a suffix of the second, we examine the length of their longest common subsequence. If $\ell$ is the length of the overlap, we prove that the expected…
The length of the longest common subsequences (LCSs) is often used as a similarity measurement to compare two (or more) random words. Below we study its statistical behavior in mean and variance using a Monte-Carlo approach from which we…
Let $(X_k)_{k\geq 1}$ and $(Y_k)_{k\geq 1}$ be two independent sequences of i.i.d. random variables, with values in a finite and totally ordered alphabet $\mathcal{A}_m:=\{1,\dots,m\}$, and having respective probability mass function…
There are many randomness notions. On the classical account, many of them are about whether a given infinite binary sequence is random for some given probability. If so, this probability turns out to be the same for all these notions, so…