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Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

Topological Data Analysis (TDA) offers a suite of computational tools that provide quantified shape features in high dimensional data that can be used by modern statistical and predictive machine learning (ML) models. In particular,…

Cryptography and Security · Computer Science 2023-07-06 Dominic Gold , Koray Karabina , Francis C. Motta

Topological constraints (TCs) between polymers determine the behaviour of complex fluids such as creams, oils and plastics. Most of the polymer solutions used every day life employ linear chains; their behaviour is accurately captured by…

Soft Condensed Matter · Physics 2020-10-07 Fabio Landuzzi , Takenobu Nakamura , Davide Michieletto , Takahiro Sakaue

Deep learning methods have demonstrated outstanding performances on classification and regression tasks on homogeneous data types (e.g., image, audio, and text data). However, tabular data still pose a challenge, with classic machine…

Machine Learning · Computer Science 2023-11-15 Antonio Briola , Yuanrong Wang , Silvia Bartolucci , Tomaso Aste

Topological data analysis has been recently applied to investigate stylistic signatures and trends in musical compositions. A useful tool in this area is Persistent Homology. In this paper, we develop a novel method to represent a weighted…

Sound · Computer Science 2022-04-26 Martín Mijangos , Alessandro Bravetti , Pablo Padilla

We consider a class of random, weighted networks, obtained through a redefinition of patterns in an Hopfield-like model and, by performing percolation processes, we get information about topology and resilience properties of the networks…

Statistical Mechanics · Physics 2015-05-30 Elena Agliari , Claudia Cioli , Enore Guadagnini

This paper investigates visual media shared by US national politicians on Twitter, how a politician's variety of image types shared reflects their political position, and identifies a hazard in using standard methods for image…

Computers and Society · Computer Science 2023-08-01 Amogh Joshi , Cody Buntain

Topological data analysis (TDA) is an area of data science that focuses on using invariants from algebraic topology to provide multiscale shape descriptors for geometric data sets such as point clouds. One of the most important such…

Computational Geometry · Computer Science 2023-06-21 David Loiseaux , Mathieu Carrière , Andrew J. Blumberg

In this paper we describe a model based on persistent homology that describes interactions between mathematicians in terms of collaborations. Some ideas from classical data analysis are used.

Algebraic Topology · Mathematics 2014-03-24 Maria Bampasidou , Thanos Gentimis

New representations of tree-structured data objects, using ideas from topological data analysis, enable improved statistical analyses of a population of brain artery trees. A number of representations of each data tree arise from…

Applications · Statistics 2014-11-26 Paul Bendich , J. S. Marron , Ezra Miller , Alex Pieloch , Sean Skwerer

Most complex systems can be captured by graphs or networks. Networks connect nodes (e.g.\ neurons) through edges (synapses), thus summarizing the system's structure. A popular way of interrogating graphs is community detection, which…

Physics and Society · Physics 2024-09-23 Luis F Seoane

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on…

Physics and Society · Physics 2012-03-29 Andrea Lancichinetti , Santo Fortunato

Topological methods are very rarely used in structural health monitoring (SHM), or indeed in structural dynamics generally, especially when considering the structure and topology of observed data. Topological methods can provide a way of…

Human-Computer Interaction · Computer Science 2022-09-14 Tristan Gowdridge , Nikolaos Dervilis , Keith Worden

Persistent homology probes topological properties from point clouds and functions. By looking at multiple scales simultaneously, one can record the births and deaths of topological features as the scale varies. In this paper we use a…

Understanding how neural networks generalize on unseen data is crucial for designing more robust and reliable models. In this paper, we study the generalization gap of neural networks using methods from topological data analysis. For this…

We extend the notion of the distance to a measure from Euclidean space to probability measures on general metric spaces as a way to do topological data analysis in a way that is robust to noise and outliers. We then give an efficient way to…

Computational Geometry · Computer Science 2014-10-09 Mickael Buchet , Frederic Chazal , Steve Y. Oudot , Donald R. Sheehy

While standard persistent homology has been successful in extracting information from metric datasets, its applicability to more general data, e.g. directed networks, is hindered by its natural insensitivity to asymmetry. We study a…

Algebraic Topology · Mathematics 2017-04-17 Samir Chowdhury , Facundo Mémoli

In many scientific and technological contexts we have only a poor understanding of the structure and details of appropriate mathematical models. We often, therefore, need to compare different models. With available data we can use formal…

Algebraic Topology · Mathematics 2021-11-04 Sean T. Vittadello , Michael P. H. Stumpf

To compute the persistent homology of a grayscale digital image one needs to build a simplicial or cubical complex from it. For cubical complexes, the two commonly used constructions (corresponding to direct and indirect digital…

Algebraic Topology · Mathematics 2024-08-26 Bea Bleile , Adélie Garin , Teresa Heiss , Kelly Maggs , Vanessa Robins
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