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The phylogenetic tree construction is to infer the evolutionary relationship between species from the experimental data. However, the experimental data are often imperfect and conflicting each others. Therefore, it is important to extract…

Artificial Intelligence · Computer Science 2007-05-23 Andy Auyeung , Ajith Abraham

We consider the Shallow-Light Steiner Network problem from a fixed-parameter perspective. Given a graph $G$, a distance bound $L$, and $p$ pairs of vertices $(s_1,t_1),\cdots,(s_p,t_p)$, the objective is to find a minimum-cost subgraph $G'$…

Data Structures and Algorithms · Computer Science 2018-03-01 Amy Babay , Michael Dinitz , Zeyu Zhang

We introduce and study two natural generalizations of the Connected VertexCover (VC) problem: the $p$-Edge-Connected and $p$-Vertex-Connected VC problem (where $p \geq 2$ is a fixed integer). Like Connected VC, both new VC problems are FPT,…

Data Structures and Algorithms · Computer Science 2022-08-23 Carl Einarson , Gregory Gutin , Bart M. P. Jansen , Diptapriyo Majumdar , Magnus Wahlstrom

In the Mixed Chinese Postman Problem (MCPP), given a weighted mixed graph $G$ ($G$ may have both edges and arcs), our aim is to find a minimum weight closed walk traversing each edge and arc at least once. The MCPP parameterized by the…

Computational Complexity · Computer Science 2015-01-27 Gregory Gutin , Mark Jones , Magnus Wahlstrom

The problem of maximizing the $p$-th power of a $p$-norm over a halfspace-presented polytope in $\R^d$ is a convex maximization problem which plays a fundamental role in computational convexity. It has been shown in 1986 that this problem…

Computational Complexity · Computer Science 2013-07-25 Christian Knauer , Stefan König , Daniel Werner

A graph on $n$ vertices is equitably $k$-colorable if it is $k$-colorable and every color is used either $\left\lfloor n/k \right\rfloor$ or $\left\lceil n/k \right\rceil$ times. Such a problem appears to be considerably harder than vertex…

Discrete Mathematics · Computer Science 2023-06-22 Guilherme de C. M. Gomes , Carlos V. G. C. Lima , Vinícius F. dos Santos

We study generalizations of the classical Vertex Cover and Edge Cover problems that incorporate group-wise coverage constraints. Our first focus is the \emph{Weighted Prize-Collecting Partition Vertex Cover} (WP-PVC) problem: given a graph…

Data Structures and Algorithms · Computer Science 2025-08-19 Rajni Dabas , Samir Khuller , Emilie Rivkin

Given a graph $G$ and a positive integer $k$, the 2-Load coloring problem is to check whether there is a $2$-coloring $f:V(G) \rightarrow \{r,b\}$ of $G$ such that for every $i \in \{r,b\}$, there are at least $k$ edges with both end…

Data Structures and Algorithms · Computer Science 2020-10-13 I. Vinod Reddy

The \emph{linear vertex arboricity} of a graph is the smallest number of sets into which the vertices of a graph can be partitioned so that each of these sets induces a linear forest. Chaplick et al. [JoCG 2020] showed that, somewhat…

Computational Complexity · Computer Science 2025-05-27 Alexander Erhardt , Alexander Wolff

We introduce and study the complexity of Path Packing. Given a graph $G$ and a list of paths, the task is to embed the paths edge-disjoint in $G$. This generalizes the well known Hamiltonian-Path problem. Since Hamiltonian Path is…

Computational Complexity · Computer Science 2019-10-02 Jan Dreier , Janosch Fuchs , Tim A. Hartmann , Philipp Kuinke , Peter Rossmanith , Bjoern Tauer , Hung-Lung Wang

Many resource allocation problems in the cloud can be described as a basic Virtual Network Embedding Problem (VNEP): the problem of finding a mapping of a request graph (describing a workload) onto a substrate graph (describing the physical…

Networking and Internet Architecture · Computer Science 2018-03-29 Matthias Rost , Stefan Schmid

A set S of vertices of a graph is a defensive alliance if, for each element of S, the majority of its neighbors is in S. The problem of finding a defensive alliance of minimum size in a given graph is NP-hard and there are polynomial-time…

Computational Complexity · Computer Science 2017-07-17 Bernhard Bliem , Stefan Woltran

In this work, we study the problem of computing a maximum common contraction of two vertex-labeled graphs, i.e. how to make them identical by contracting as little edges as possible in the two graphs. We study the problem from a…

Data Structures and Algorithms · Computer Science 2025-07-01 Manuel Lafond , Bertrand Marchand

We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…

Data Structures and Algorithms · Computer Science 2026-04-01 Tom-Lukas Breitkopf , Vincent Froese , Anton Herrmann , André Nichterlein , Camille Richer

We study a broad class of graph partitioning problems, where each problem is specified by a graph $G=(V,E)$, and parameters $k$ and $p$. We seek a subset $U\subseteq V$ of size $k$, such that $\alpha_1m_1 + \alpha_2m_2$ is at most (or at…

Data Structures and Algorithms · Computer Science 2014-03-04 Hadas Shachnai , Meirav Zehavi

Problems in scientific computing, such as distributing large sparse matrix operations, have analogous formulations as hypergraph partitioning problems. A hypergraph is a generalization of a traditional graph wherein "hyperedges" may connect…

Data Structures and Algorithms · Computer Science 2022-06-16 Justin Sybrandt , Ruslan Shaydulin , Ilya Safro

In this paper we investigate the colorful components framework, motivated by applications emerging from comparative genomics. The general goal is to remove a collection of edges from an undirected vertex-colored graph $G$ such that in the…

Data Structures and Algorithms · Computer Science 2013-11-07 Anna Adamaszek , Alexandru Popa

A prototypical graph problem is centered around a graph-theoretic property for a set of vertices and a solution to it is a set of vertices for which the desired property holds. The task is to decide whether, in the given graph, there exists…

Computational Complexity · Computer Science 2020-06-11 Dušan Knop , Tomáš Masařík , Tomáš Toufar

Given a graph $G = (V,E)$ with vertex weights $w(v)$ and a desired number of parts $k$, the goal in graph partitioning problems is to partition the vertex set V into parts $V_1,\ldots,V_k$. Metrics for compactness, contiguity, and balance…

Data Structures and Algorithms · Computer Science 2021-02-10 Cyrus Hettle , Shixiang Zhu , Swati Gupta , Yao Xie

A directed graph G (V, E) is strongly connected if and only if, for a pair of vertices X and Y from V, there exists a path from X to Y and a path from Y to X. In Computer Science, the partition of a graph in strongly connected components is…

Data Structures and Algorithms · Computer Science 2018-02-16 Vlad-Andrei Munteanu
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