English
Related papers

Related papers: SCN as a Local Probe of Protein Structural Dynamic…

200 papers

Semiconductor spin noise spectroscopy (SNS) has emerged as a unique experimental tool that utilizes spin fluctuations to provide profound insight into undisturbed spin dynamics in doped semiconductors and semiconductor nanostructures. The…

Mesoscale and Nanoscale Physics · Physics 2011-03-28 G. M. Müller , M. Oestreich , M. Römer , J. Hübner

The application of surface plasmon resonance (SPR) has transformed the field of study of interactions between a ligand immobilized on the surface of a sensor chip, designated as $L_S$, and an analyte in solution, referred to as $A$. This…

Any time variation in the fine-structure constant alters the ionization history of the universe and therefore changes the pattern of cosmic microwave background fluctuations. We calculate the changes in the spectrum of these fluctuations as…

Astrophysics · Physics 2009-10-31 Manoj Kaplinghat , Robert J. Scherrer , Michael S. Turner

Protein structural classification (PSC) is a supervised problem of assigning proteins into pre-defined structural (e.g., CATH or SCOPe) classes based on the proteins' sequence or 3D structural features. We recently proposed PSC approaches…

Molecular Networks · Quantitative Biology 2021-05-18 Khalique Newaz , Jacob Piland , Patricia L. Clark , Scott J. Emrich , Jun Li , Tijana Milenkovic

Convolutional layers have long served as the primary workhorse for image classification. Recently, an alternative to convolution was proposed using the Sharpened Cosine Similarity (SCS), which in theory may serve as a better feature…

Computer Vision and Pattern Recognition · Computer Science 2023-07-27 Skyler Wu , Fred Lu , Edward Raff , James Holt

Millimeter-wave (mmWave) sensing enables privacy-preserving, always-on edge perception, but its measurements are often sparse, temporally irregular, and corrupted by high-frequency noise. Existing mmWave pipelines predominantly rely on…

Neural and Evolutionary Computing · Computer Science 2026-05-12 Di Yu , Zhenyu Liao , Changze Lv , Wentao Tong , Linshan Jiang , Sijie Ji , Xin Du , Hailiang Zhao , Xiaoqing Zheng , Shuiguang Deng

Conditional t-SNE (ct-SNE) is a recent extension to t-SNE that allows removal of known cluster information from the embedding, to obtain a visualization revealing structure beyond label information. This is useful, for example, when one…

Machine Learning · Computer Science 2023-04-12 Edith Heiter , Bo Kang , Ruth Seurinck , Jefrey Lijffijt

The microscopic arrangement of atoms and molecules is the determining factor in how materials behave and perform. Beyond the long-range periodicity, the local disorder with local structures deviating from the average lattice structure plays…

Materials Science · Physics 2024-05-15 Jingjun Li , Yingpeng Qi , Qing Yang , Luye Yue , Changyuan Yao , Zijing Chen , Sheng Meng , Dao Xiang , Jianming Cao

Semi-supervised change detection (SSCD) aims to detect changes between bi-temporal remote sensing images by utilizing limited labeled data and abundant unlabeled data. Existing methods struggle in complex scenarios, exhibiting poor…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Qi'ao Xu , Pengfei Wang , Yanjun Li , Tianwen Qian , Xiaoling Wang

The laser spectroscopy is a fundamental approach for the realisation of traceable optical frequency standards. In the $1.55\,\mu$m wavelength band, widely used in telecommunications, the acetylene is the typical and the most widespread…

Among wurtzite-type ferroelectrics, scandium-doped aluminum nitride (ScAlN) has emerged as a leading candidate for CMOS-compatible low-voltage memory, combining strong spontaneous polarization with process compatibility. A remarkable…

Materials Science · Physics 2026-03-20 Ryotaro Sahashi , Po-Yen Chen , Teruyasu Mizoguchi

Texture is one of the most-studied visual attribute for image characterization since the 1960s. However, most hand-crafted descriptors are monochromatic, focusing on the gray scale images and discarding the color information. In this…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Leonardo F. S. Scabini , Lucas C. Ribas , Odemir M. Bruno

Although two-stage object detectors have continuously advanced the state-of-the-art performance in recent years, the training process itself is far from crystal. In this work, we first point out the inconsistency problem between the fixed…

Computer Vision and Pattern Recognition · Computer Science 2020-07-28 Hongkai Zhang , Hong Chang , Bingpeng Ma , Naiyan Wang , Xilin Chen

We report a comprehensive Cu $K$-edge RIXS investigation of $\rm La_{2-x}Sr_xCuO_4$ (LSCO) for 0$\leq$x$\leq$0.35, stripe-ordered $\rm La_{1.875}Ba_{0.125}CuO_4$ (LBCO), and $\rm La_{2}Cu_{0.96}Ni_{0.04}O_4$ (LCNO) crystals. The RIXS…

Strongly Correlated Electrons · Physics 2015-05-27 D. S. Ellis , Jungho Kim , Harry Zhang , J. P. Hill , Genda Gu , Seiki Komiya , Yoichi Ando , D. Casa , T. Gog , Young-June Kim

Current self-supervised denoising methods for paired noisy images typically involve mapping one noisy image through the network to the other noisy image. However, after measuring the spectral bias of such methods using our proposed Image…

Computer Vision and Pattern Recognition · Computer Science 2025-10-02 Wang Zhang , Huaqiu Li , Xiaowan Hu , Tao Jiang , Zikang Chen , Haoqian Wang

A protein residue network (PRN) is a network of interacting amino acids within a protein. We describe characteristics of a sparser, highly central and more volatile sub-network of a PRN called the short-cut network (SCN), as a protein folds…

Molecular Networks · Quantitative Biology 2015-08-13 Susan Khor

We study a large data set of protein structure ensembles of very diverse sizes determined by nuclear magnetic resonance. By examining the distance-dependent correlations in the displacement of residues pairs and conducting finite size…

Biological Physics · Physics 2017-03-01 Qian-Yuan Tang , Yang-Yang Zhang , Jun Wang , Wei Wang , Dante R. Chialvo

Contrastive learning, especially self-supervised contrastive learning (SSCL), has achieved great success in extracting powerful features from unlabeled data. In this work, we contribute to the theoretical understanding of SSCL and uncover…

Machine Learning · Computer Science 2023-06-05 Tianyang Hu , Zhili Liu , Fengwei Zhou , Wenjia Wang , Weiran Huang

Structure from Motion (SfM) using imagery that involves extreme appearance changes is yet a challenging task due to a loss of feature repeatability. Using feature correspondences obtained by matching densely extracted convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2018-05-14 Aji Resindra Widya , Akihiko Torii , Masatoshi Okutomi