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Protein structure prediction is one of the most important problems in computational biology. The most successful computational approach, also called template-based modeling, identifies templates with solved crystal structures for the query…

Biomolecules · Quantitative Biology 2013-06-20 Jian Peng

Learned Sparse Retrieval (LSR) is an effective IR approach that exploits pre-trained language models for encoding text into a learned bag of words. Several efforts in the literature have shown that sparsity is key to enabling a good…

Information Retrieval · Computer Science 2025-05-06 Franco Maria Nardini , Thong Nguyen , Cosimo Rulli , Rossano Venturini , Andrew Yates

Multivariate cortico-muscular analysis has recently emerged as a promising approach for evaluating the corticospinal neural pathway. However, current multivariate approaches encounter challenges such as high dimensionality and limited…

Multimodal Large Language Models (MLLMs) possess intrinsic reasoning and world-knowledge capabilities, yet adapting them for dense retrieval remains challenging. Existing approaches rely on invasive parameter updates, such as full…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Haoran Lou , Ziyan Liu , Chunxiao Fan , Yuexin Wu , Yue Ming , Hao Wu , Kai Zuo , Yibo Chen , Xu Tang

Parallel data are an important part of a reliable Statistical Machine Translation (SMT) system. The more of these data are available, the better the quality of the SMT system. However, for some language pairs such as Persian-English,…

Computation and Language · Computer Science 2019-04-02 Akbar Karimi , Ebrahim Ansari , Bahram Sadeghi Bigham

Pre-trained language models (PLM), for example BERT or RoBERTa, mark the state-of-the-art for natural language understanding task when fine-tuned on labeled data. However, their large size poses challenges in deploying them for inference in…

Machine Learning · Computer Science 2024-08-27 Aaron Klein , Jacek Golebiowski , Xingchen Ma , Valerio Perrone , Cedric Archambeau

Traditional post-training quantization (PTQ) is considered an effective approach to reduce model size and accelerate inference of large-scale language models (LLMs). However, existing low-rank PTQ methods require costly fine-tuning to…

Machine Learning · Computer Science 2026-01-12 Hongyaoxing Gul , Lijuan Hu , Shuzi Niu , Fangfang Liu

Across a variety of scientific disciplines, sparse inverse covariance estimation is a popular tool for capturing the underlying dependency relationships in multivariate data. Unfortunately, most estimators are not scalable enough to handle…

Code translation migrates codebases across programming languages. Recently, large language models (LLMs) have achieved significant advancements in software mining. However, handling the syntactic structure of source code remains a…

Software Engineering · Computer Science 2025-10-14 Yali Du , Hui Sun , Ming Li

We present and apply two methods for addressing the problem of selecting relevant training data out of a general pool for use in tasks such as machine translation. Building on existing work on class-based language difference models, we…

Computation and Language · Computer Science 2019-04-11 Lucía Santamaría , Amittai Axelrod

This work focuses on the issue of variable selection in functional regression. Unlike most work in this framework, our approach does not select isolated points in the definition domain of the predictors, nor does it rely on the expansion of…

Statistics Theory · Mathematics 2018-03-05 Victor Picheny , Rémi Servien , Nathalie Villa-Vialaneix

Click-through rate (CTR) prediction plays as a core function module in various personalized online services. The traditional ID-based models for CTR prediction take as inputs the one-hot encoded ID features of tabular modality, which…

Information Retrieval · Computer Science 2024-10-31 Hangyu Wang , Jianghao Lin , Xiangyang Li , Bo Chen , Chenxu Zhu , Ruiming Tang , Weinan Zhang , Yong Yu

Organisations store huge amounts of data from multiple heterogeneous sources in the form of Knowledge Graphs (KGs). One of the ways to query these KGs is to use SPARQL queries over a database engine. Since SPARQL follows exact match…

Databases · Computer Science 2017-11-22 Madhulika Mohanty , Maya Ramanath , Mohamed Yahya , Gerhard Weikum

Lecture transcript translation helps learners understand online courses, however, building a high-quality lecture machine translation system lacks publicly available parallel corpora. To address this, we examine a framework for parallel…

Computation and Language · Computer Science 2023-11-08 Haiyue Song , Raj Dabre , Chenhui Chu , Atsushi Fujita , Sadao Kurohashi

Large Language Models (LLMs) have transformed the landscape of artificial intelligence, while their enormous size presents significant challenges in terms of computational costs. We introduce LoRAShear, a novel efficient approach to…

Computation and Language · Computer Science 2023-11-01 Tianyi Chen , Tianyu Ding , Badal Yadav , Ilya Zharkov , Luming Liang

Top-K masking schemes have been proposed as a method to promote sparse representations in Information Retrieval (IR) tasks, as a simple alternative to Floating Point Operations per Second (FLOPS) regularization. Algorithms such as Bilingual…

Information Retrieval · Computer Science 2025-10-23 Joseph Casale , Andrew Silverschotz , Joseph DeSimone

This paper describes a compact and effective model for low-latency passage retrieval in conversational search based on learned dense representations. Prior to our work, the state-of-the-art approach uses a multi-stage pipeline comprising…

Information Retrieval · Computer Science 2021-11-30 Sheng-Chieh Lin , Jheng-Hong Yang , Jimmy Lin

Polarization-adjusted convolutional (PAC) codes can approach the theoretical bound for block error rate (BLER) performance at short-to-medium codeword length. PAC codes have excellent BLER performance using Monte Carlo (MC) rate-profiles…

Information Theory · Computer Science 2023-04-25 Shirong Jiang , Jiahao Wang , Chunfang Xia , Xiang Li

Natural language inference (NLI) is an increasingly important task for natural language understanding, which requires one to infer the relationship between the sentence pair (premise and hypothesis). Many recent works have used contrastive…

Computation and Language · Computer Science 2022-05-02 Shu'ang Li , Xuming Hu , Li Lin , Lijie Wen

Spreadsheets are a ubiquitous software tool, used for a wide variety of tasks such as financial modelling, statistical analysis and inventory management. Extracting meaningful information from such data can be a difficult task, especially…

Software Engineering · Computer Science 2009-08-11 Derek Flood , Kevin Mc Daid , Fergal Mc Caffery