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We consider competitive algorithms for adaptive group testing problems. In the first part of the paper, we develop an algorithm with competitive constant c < 1.452 thus improving the up to now best known algorithms with constants…

Combinatorics · Mathematics 2020-12-07 Robert Scheidweiler , Eberhard Triesch

We consider a version of the classical group testing problem motivated by PCR testing for COVID-19. In the so-called tropical group testing model, the outcome of a test is the lowest cycle threshold (Ct) level of the individuals pooled…

Information Theory · Computer Science 2024-10-15 Vivekanand Paligadu , Oliver Johnson , Matthew Aldridge

In this paper, we consider the group testing problem with adaptive test designs and noisy outcomes. We propose a computationally efficient four-stage procedure with components including random binning, identification of bins containing…

Computation · Statistics 2019-11-11 Jonathan Scarlett

Large scale disease screening is a complicated process in which high costs must be balanced against pressing public health needs. When the goal is screening for infectious disease, one approach is group testing in which samples are…

Applications · Statistics 2021-03-02 Gregory Haber , Yaakov Malinovsky , Paul S. Albert

In this paper, we consider the problem of noiseless non-adaptive group testing under the for-each recovery guarantee, also known as probabilistic group testing. In the case of $n$ items and $k$ defectives, we provide an algorithm attaining…

Information Theory · Computer Science 2020-06-19 Eric Price , Jonathan Scarlett

We formulate and analyze a stochastic threshold group testing problem motivated by biological applications. Here a set of $n$ items contains a subset of $d \ll n$ defective items. Subsets (pools) of the $n$ items are tested -- the test…

Information Theory · Computer Science 2013-04-25 Chun Lam Chan , Sheng Cai , Mayank Bakshi , Sidharth Jaggi , Venkatesh Saligrama

We consider a zero-error probabilistic group testing problem where individuals are defective independently but not with identical probabilities. We propose a greedy set formation method to build sets of individuals to be tested together. We…

Information Theory · Computer Science 2021-08-30 Mustafa Doger , Sennur Ulukus

Hypergraph clustering is a basic algorithmic primitive for analyzing complex datasets and systems characterized by multiway interactions, such as group email conversations, groups of co-purchased retail products, and co-authorship data.…

Data Structures and Algorithms · Computer Science 2023-01-31 Nate Veldt

In one-stage or non-adaptive group testing, instead of testing every sample unit individually, they are split, bundled in pools, and simultaneously tested. The results are then decoded to infer the states of the individual items. This…

Applications · Statistics 2020-12-04 Christoph Schumacher , Matthias Täufer

In the study of deterministic distributed algorithms it is commonly assumed that each node has a unique $O(\log n)$-bit identifier. We prove that for a general class of graph problems, local algorithms (constant-time distributed algorithms)…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-12-24 Mika Göös , Juho Hirvonen , Jukka Suomela

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

We investigate distribution testing with access to non-adaptive conditional samples. In the conditional sampling model, the algorithm is given the following access to a distribution: it submits a query set $S$ to an oracle, which returns a…

Data Structures and Algorithms · Computer Science 2018-11-06 Gautam Kamath , Christos Tzamos

Consider a collection of objects, some of which may be `bad', and a test which determines whether or not a given sub-collection contains no bad objects. The non-adaptive pooling (or group testing) problem involves identifying the bad…

Combinatorics · Mathematics 2016-09-06 David J. Balding , David C. Torney

Several biological and social contagion phenomena, such as superspreading events or social reinforcement, are the results of multi-body interactions, for which hypergraphs offer a natural mathematical description. In this paper, we develop…

In this paper, we study the problem of non-adaptive group testing, in which one seeks to identify which items are defective given a set of suitably-designed tests whose outcomes indicate whether or not at least one defective item was…

Information Theory · Computer Science 2025-09-26 Lan V. Truong , Matthew Aldridge , Jonathan Scarlett

This paper presents a new generalization error analysis for Decentralized Stochastic Gradient Descent (D-SGD) based on algorithmic stability. The obtained results overhaul a series of recent works that suggested an increased instability due…

Machine Learning · Computer Science 2024-06-14 Batiste Le Bars , Aurélien Bellet , Marc Tommasi , Kevin Scaman , Giovanni Neglia

A massive dataset often consists of a growing number of (potentially) heterogeneous sub-populations. This paper is concerned about testing various forms of heterogeneity arising from massive data. In a general nonparametric framework, a set…

Statistics Theory · Mathematics 2016-01-26 Junwei Lu , Guang Cheng , Han Liu

In the standard CONGEST model for distributed network computing, it is known that "global" tasks such as minimum spanning tree, diameter, and all-pairs shortest paths, consume large bandwidth, for their running-time is…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-14 Pierre Fraigniaud , Pedro Montealegre , Dennis Olivetti , Ivan Rapaport , Ioan Todinca

Given a graph $G = (V,E)$, an $(\alpha, \beta)$-ruling set is a subset $S \subseteq V$ such that the distance between any two vertices in $S$ is at least $\alpha$, and the distance between any vertex in $V$ and the closest vertex in $S$ is…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-03 Alkida Balliu , Sebastian Brandt , Dennis Olivetti

In this work we study the fundamental limits of approximate recovery in the context of group testing. One of the most well-known, theoretically optimal, and easy to implement testing procedures is the non-adaptive Bernoulli group testing…

Statistics Theory · Mathematics 2021-07-30 Fotis Iliopoulos , Ilias Zadik