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Graph neural networks (GNNs) have become a standard paradigm for graph representation learning, yet their message passing mechanism implicitly assumes that messages can be represented by source node embeddings, an assumption that fails in…

Artificial Intelligence · Computer Science 2026-03-02 Dawei Cheng , Wenjun Wang , Mingjian Guang

Parameter Efficient Finetuning (PEFT) has emerged as a viable solution for improving the performance of Large Language Models (LLMs) without requiring massive resources and compute. Prior work on multilingual evaluation has shown that there…

Computation and Language · Computer Science 2024-07-23 Divyanshu Aggarwal , Ashutosh Sathe , Ishaan Watts , Sunayana Sitaram

The NLI4CT task assesses Natural Language Inference systems in predicting whether hypotheses entail or contradict evidence from Clinical Trial Reports. In this study, we evaluate various Large Language Models (LLMs) with multiple…

Computation and Language · Computer Science 2024-04-02 Aryo Pradipta Gema , Giwon Hong , Pasquale Minervini , Luke Daines , Beatrice Alex

Time, cost, and energy efficiency are critical considerations in Deep-Learning (DL), particularly when processing long texts. Transformers, which represent the current state of the art, exhibit quadratic computational complexity relative to…

Computation and Language · Computer Science 2025-07-11 Fardin Rastakhiz

Pre-trained graph neural networks (GNNs) transfer well, but adapting them to downstream tasks remains challenging due to mismatches between pre-training objectives and task requirements. Graph prompt tuning offers a parameter-efficient…

Machine Learning · Computer Science 2026-02-06 Long D. Nguyen , Binh P. Nguyen

The latest advancements in large language models (LLMs) have revolutionized the field of natural language processing (NLP). Inspired by the success of LLMs in NLP tasks, some recent work has begun investigating the potential of applying…

Artificial Intelligence · Computer Science 2025-02-25 Shengyin Sun , Yuxiang Ren , Jiehao Chen , Chen Ma

Automated code smell detection faces persistent challenges due to the subjectivity of heuristic rules and the limited performance of traditional ML/DL models. While Large Language Models (LLMs) offer a promising alternative, their adoption…

Software Engineering · Computer Science 2026-03-30 Beiqi Zhang , Peng Liang , Xin Zhou , Xiyu Zhou , David Lo , Qiong Feng , Zengyang Li , Lin Li

Graphs play an important role in representing complex relationships in various domains like social networks, knowledge graphs, and molecular discovery. With the advent of deep learning, Graph Neural Networks (GNNs) have emerged as a…

Machine Learning · Computer Science 2024-06-05 Wenqi Fan , Shijie Wang , Jiani Huang , Zhikai Chen , Yu Song , Wenzhuo Tang , Haitao Mao , Hui Liu , Xiaorui Liu , Dawei Yin , Qing Li

In recent years, Graph Neural Networks (GNNs) have become successful in molecular property prediction tasks such as toxicity analysis. However, due to the black-box nature of GNNs, their outputs can be concerning in high-stakes…

Machine Learning · Computer Science 2024-10-22 Yinhan He , Zaiyi Zheng , Patrick Soga , Yaozhen Zhu , yushun Dong , Jundong Li

Parameter-Efficient Fine-Tuning (PEFT) provides a practical way for users to customize Large Language Models (LLMs) with their private data in LLM service scenarios. However, the inherently sensitive nature of private data demands robust…

Computation and Language · Computer Science 2025-10-13 Yansong Li , Zhixing Tan , Paula Branco , Yang Liu

Fine-tuning large language models (LLMs) aims to adapt pre-trained models to specific tasks using relatively small and domain-specific datasets. Among Parameter-Efficient Fine-Tuning (PEFT) methods, Low-Rank Adaptation (LoRA) stands out by…

Computation and Language · Computer Science 2026-04-16 Yarui Cao , Kai Liu

Large language models (LLMs) have presented significant opportunities to enhance various machine learning applications, including graph neural networks (GNNs). By leveraging the vast open-world knowledge within LLMs, we can more effectively…

Machine Learning · Computer Science 2025-02-18 Yuxia Wu , Shujie Li , Yuan Fang , Chuan Shi

Graph Neural Networks (GNNs) have become the state-of-the-art method for many applications on graph structured data. GNNs are a model for graph representation learning, which aims at learning to generate low dimensional node embeddings that…

Machine Learning · Computer Science 2022-05-23 Davide Buffelli , Fabio Vandin

Inspired by the recent advancements of Large Language Models (LLMs) in NLP tasks, there's growing interest in applying LLMs to graph-related tasks. This study delves into the capabilities of instruction-following LLMs for engaging with…

Computation and Language · Computer Science 2024-08-13 Kerui Zhu , Bo-Wei Huang , Bowen Jin , Yizhu Jiao , Ming Zhong , Kevin Chang , Shou-De Lin , Jiawei Han

Foundation models, such as Large Language Models (LLMs) or Large Vision Models (LVMs), have emerged as one of the most powerful tools in the respective fields. However, unlike text and image data, graph data do not have a definitive…

Machine Learning · Computer Science 2025-04-28 Lecheng Kong , Jiarui Feng , Hao Liu , Chengsong Huang , Jiaxin Huang , Yixin Chen , Muhan Zhang

As large language models (LLMs) continue to grow, the cost of full-parameter fine-tuning has made parameter-efficient fine-tuning (PEFT) the default strategy for downstream adaptation. Constraints from inference latency in scalable serving…

Machine Learning · Computer Science 2026-02-10 Yichen Xu , Yuyang Liang , Shan Dai , Tianyang Hu , Tsz Nam Chan , Chenhao Ma

Multimodal instruction tuning has proven to be an effective strategy for achieving zero-shot generalization by fine-tuning pre-trained Large Multimodal Models (LMMs) with instruction-following data. However, as the scale of LMMs continues…

Fine-tuning large language models (LLMs) remains a computational bottleneck due to their scale and memory demands. This paper presents a comprehensive evaluation of parameter-efficient fine-tuning (PEFT) techniques, including LoRA, BOFT,…

Computation and Language · Computer Science 2026-01-06 Haomin Qi , Zihan Dai , Chengbo Huang

The integration of multi-omic data is pivotal for understanding complex diseases, but its high dimensionality and noise present significant challenges. Graph Neural Networks (GNNs) offer a robust framework for analyzing large-scale…

Quantitative Methods · Quantitative Biology 2024-12-23 Heming Zhang , Di Huang , Yixin Chen , Fuhai Li

Fine-tuning Large Language Models (LLMs) typically involves either full fine-tuning, which updates all model parameters, or Parameter-Efficient Fine-Tuning (PEFT), which adjusts a small subset of parameters. However, both approaches have…

Artificial Intelligence · Computer Science 2026-04-14 Shaocong Ma , Peiran Yu , Heng Huang
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