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As modern science becomes increasingly data-intensive, the ability to analyze and visualize large-scale, complex datasets is critical to accelerating discovery. However, many domain scientists lack the programming expertise required to…

Software Engineering · Computer Science 2025-12-01 Apu Kumar Chakroborti , Yi Ding , Lipeng Wan

Large language models (LLMs) have been touted to enable increased productivity in many areas of today's work life. Scientific research as an area of work is no exception: the potential of LLM-based tools to assist in the daily work of…

Software Engineering · Computer Science 2024-04-24 Mohamed Nejjar , Luca Zacharias , Fabian Stiehle , Ingo Weber

The use of large language models (LLMs) in scholarly publications has grown dramatically since the launch of ChatGPT in late 2022. This usage is often undisclosed, and it can be challenging for readers and reviewers to identify human…

Digital Libraries · Computer Science 2025-12-02 Andrew Gray

With the exponential increase in online scientific literature, identifying reliable domain-specific data has become increasingly important but also very challenging. Manual data collection and filtering for domain-specific scientific…

Information Retrieval · Computer Science 2026-03-10 Nikita Gautam , Doina Caragea , Ignacio Ciampitti , Federico Gomez

Maintaining software packages imposes significant costs due to dependency management, bug fixes, and versioning. We show that rich method descriptions in scientific publications can serve as standalone specifications for modern large…

Software Engineering · Computer Science 2025-07-31 Cameron S. Movassaghi , Amanda Momenzadeh , Jesse G. Meyer

Literature research, vital for scientific work, faces the challenge of surging information volumes exceeding researchers' processing capabilities. We present an automated review generation method based on large language models (LLMs) to…

Computation and Language · Computer Science 2025-05-02 Shican Wu , Xiao Ma , Dehui Luo , Lulu Li , Xiangcheng Shi , Xin Chang , Xiaoyun Lin , Ran Luo , Chunlei Pei , Changying Du , Zhi-Jian Zhao , Jinlong Gong

Conducting literature reviews for scientific papers is essential for understanding research, its limitations, and building on existing work. It is a tedious task which makes an automatic literature review generator appealing. Unfortunately,…

Large Language Models (LLMs) have advanced rapidly as tools for automating code generation in scientific research, yet their ability to interpret and use unfamiliar Python APIs for complex computational experiments remains poorly…

Software Engineering · Computer Science 2025-09-17 Nuno Fachada , Daniel Fernandes , Carlos M. Fernandes , Bruno D. Ferreira-Saraiva , João P. Matos-Carvalho

The pace of scientific research, vital for improving human life, is complex, slow, and needs specialized expertise. Meanwhile, novel, impactful research often stems from both a deep understanding of prior work, and a cross-pollination of…

Computation and Language · Computer Science 2025-02-11 Jinheon Baek , Sujay Kumar Jauhar , Silviu Cucerzan , Sung Ju Hwang

Large Language Models (LLMs) are rapidly reshaping scientific research. We analyze these changes in multiple, large-scale datasets with 2.1M preprints, 28K peer review reports, and 246M online accesses to scientific documents. We find: 1)…

Digital Libraries · Computer Science 2026-01-21 Keigo Kusumegi , Xinyu Yang , Paul Ginsparg , Mathijs de Vaan , Toby Stuart , Yian Yin

Scientific publishing lays the foundation of science by disseminating research findings, fostering collaboration, encouraging reproducibility, and ensuring that scientific knowledge is accessible, verifiable, and built upon over time.…

As scientific research becomes increasingly complex, innovative tools are needed to manage vast data, facilitate interdisciplinary collaboration, and accelerate discovery. Large language models (LLMs) are now evolving into LLM-based…

Artificial Intelligence · Computer Science 2026-02-03 Shuo Ren , Can Xie , Pu Jian , Zhenjiang Ren , Chunlin Leng , Jiajun Zhang

Objective: This study aims to summarize the usage of Large Language Models (LLMs) in the process of creating a scientific review. We look at the range of stages in a review that can be automated and assess the current state-of-the-art…

Digital Libraries · Computer Science 2025-05-16 Dmitry Scherbakov , Nina Hubig , Vinita Jansari , Alexander Bakumenko , Leslie A. Lenert

The widespread adoption of Large Language Models (LLMs) and publicly available ChatGPT have marked a significant turning point in the integration of Artificial Intelligence (AI) into people's everyday lives. This study examines the ability…

Computation and Language · Computer Science 2025-10-28 Sandeep Kumar , Tirthankar Ghosal , Vinayak Goyal , Asif Ekbal

The rapid advancement of large language models (LLMs) has opened new possibilities for automating the proposal of innovative scientific ideas. This process involves two key phases: literature retrieval and idea generation. However, existing…

Computation and Language · Computer Science 2025-02-18 Wenxiao Wang , Lihui Gu , Liye Zhang , Yunxiang Luo , Yi Dai , Chen Shen , Liang Xie , Binbin Lin , Xiaofei He , Jieping Ye

Large Language Models (LLMs) have garnered remarkable advancements across diverse code-related tasks, known as Code LLMs, particularly in code generation that generates source code with LLM from natural language descriptions. This…

Computation and Language · Computer Science 2025-10-28 Juyong Jiang , Fan Wang , Jiasi Shen , Sungju Kim , Sunghun Kim

Automatic research with Large Language Models (LLMs) is rapidly gaining importance, driving the development of increasingly complex workflows involving multi-agent systems, planning, tool usage, code execution, and human-agent interaction…

Computation and Language · Computer Science 2025-10-09 Haofei Yu , Keyang Xuan , Fenghai Li , Kunlun Zhu , Zijie Lei , Jiaxun Zhang , Ziheng Qi , Kyle Richardson , Jiaxuan You

As Large Language Models (LLMs) and other forms of Generative AI permeate various aspects of our lives, their application for learning and education has provided opportunities and challenges. This paper presents an investigation into the…

Computers and Society · Computer Science 2023-06-06 Daniel Leiker , Sara Finnigan , Ashley Ricker Gyllen , Mutlu Cukurova

The principles of automation and innovation serve as foundational elements for advancement in contemporary science and technology. Here, we introduce Pygen, an automation platform designed to empower researchers, technologists, and…

Software Engineering · Computer Science 2025-06-13 Saikat Barua , Mostafizur Rahman , Md Jafor Sadek , Rafiul Islam , Shehenaz Khaled , Md. Shohrab Hossain

Abstract. Automatically generating scientific literature surveys is a valuable task that can significantly enhance research efficiency. However, the diverse and complex nature of information within a literature survey poses substantial…

Computation and Language · Computer Science 2024-08-16 Yuxuan Lai , Yupeng Wu , Yidan Wang , Wenpeng Hu , Chen Zheng
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