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In this paper we present a framework for investigating coloured noise in reaction-diffusion systems. We start by considering a deterministic reaction-diffusion equation and show how external forcing can cause temporally correlated or…

Quantitative Methods · Quantitative Biology 2018-12-03 Michael F Adamer , Heather A Harrington , Eamonn A Gaffney , Thomas E Woolley

Characterizing current fluctuations in a steady state is of fundamental interest and has attracted considerable attention in the recent past. However, the bulk of the studies are limited to systems that either do not exhibit a phase…

Statistical Mechanics · Physics 2024-12-05 Tanmoy Chakraborty , Punyabrata Pradhan , Kavita Jain

Consider a system of particles evolving as independent and identically distributed (i.i.d.) random walks. Initial fluctuations in the particle density get translated over time with velocity $\vec{v}$, the common mean velocity of the random…

Probability · Mathematics 2010-09-15 Rohini Kumar

Many molecular junctions display stochastic telegraphic switching between two distinct current values, which is therefore an important source of fluctuations in nanoscale quantum transport. We investigate electronic fluctuations arising via…

Mesoscale and Nanoscale Physics · Physics 2019-12-25 Samuel L. Rudge , Daniel S. Kosov

We consider a coarse-grained description of a system of self-propelled particles given by hydrodynamic equations for the density and polarization fields. We find that the ordered moving or flocking state of the system is unstable to spatial…

Statistical Mechanics · Physics 2013-05-29 Shradha Mishra , Aparna Baskaran , M. Cristina Marchetti

Active fluids generate spontaneous, often chaotic mesoscale flows. Harnessing these flows to drive embedded soft materials into structures with controlled length scales and lifetimes is a key challenge at the interface between the fields of…

Soft Condensed Matter · Physics 2025-02-19 Layne B. Frechette , Aparna Baskaran , Michael F. Hagan

Transport of liquid mixtures through porous membranes is central to processes such as desalination, chemical separations and energy harvesting, with ultrathin membranes made from novel 2D nanomaterials showing exceptional promise. Here we…

Soft Condensed Matter · Physics 2019-08-06 Daniel J. Rankin , Lydéric Bocquet , David M. Huang

Fluctuations in the large-scale structure of the Universe contain significant information about cosmological physics, but are modulated in survey datasets by various observational effects. Building on existing literature, we provide a…

Cosmology and Nongalactic Astrophysics · Physics 2019-08-14 Chris Blake

Electronic transport properties for single-molecule junctions have been widely measured by several techniques, including mechanically controllable break junctions, electromigration break junctions or by means of scanning tunneling…

Mesoscale and Nanoscale Physics · Physics 2020-07-22 Ferdinand Evers , Richard Korytár , Sumit Tewari , Jan M. van Ruitenbeek

Biochemical reaction networks in living cells usually involve reversible covalent modification of signaling molecules, such as protein phosphorylation. Under conditions of small molecule numbers, as is frequently the case in living cells,…

Molecular Networks · Quantitative Biology 2013-05-29 C. Metzner , M. Sajitz-Hermstein , M. Schmidberger , B. Fabry

Electronic transport in a model molecular device coupled to local phonon modes is theoretically analyzed. The method allows for obtaining an accurate approximation of the system's quantum state irrespective of the electron and phonon energy…

Mesoscale and Nanoscale Physics · Physics 2007-10-10 Antonino La Magna , Ioannis Deretzis

Microscopic current fluctuations are inseparable from conductance. We give an integral account of both quantized conductance and nonequilibrium thermal noise in one-dimensional ballistic wires. Our high-current noise theory opens a very…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 Frederick Green , Mukunda P Das

We study the dynamics of dephasing in a quantum two-level system by modeling both 1/f and high-frequency noise by random telegraph processes. Our approach is based on a so-called spin-fluctuator model in which a noisy environment is modeled…

Quantum Physics · Physics 2014-12-01 Alexander I. Nesterov , Gennady P. Berman

The filtration of fluid in 2D porous medium is simulated by the molecular dynamics technique. The high concentration of fluid is created at the initial point in time and the number of fluid particles is investigated in all porous. The…

Fluid Dynamics · Physics 2007-05-23 Marat N. Ovchinnikov

We analyze the microscopic dynamics of vortex motion through channels that form river-like fractal networks in a variety of superconducting samples, and relate it to macroscopic measurable quantities such as the power spectrum. As a…

Superconductivity · Physics 2009-10-31 C. J. Olson , C. Reichhardt , Franco Nori

We present a scattering theory description for the inelastic current noise in the presence of electron-vibration interactions. In this description, we specify elastic and inelastic scattering contributions to the shot noise by examining…

Mesoscale and Nanoscale Physics · Physics 2017-09-15 Sejoong Kim

Molecular dynamics simulations are used to study the behavior of closely-fitting spherical and ellipsoidal particles moving through a fluid-filled cylinder at nanometer scales. The particle, the cylinder wall and the fluid solvent are all…

Soft Condensed Matter · Physics 2007-05-23 German Drazer , Boris Khusid , Joel Koplik , Andreas Acrivos

Transport phenomena are ubiquitous throughout the science, engineering and technology disciplines as it concerns energy, mass, charge and information exchange between systems. In particular, energy transport in the nanoscale regime has…

Quantum Physics · Physics 2018-07-26 Chikako Uchiyama , William J. Munro , Kae Nemoto

Miniaturized, self-propelled locomotors use chemo-mechanical transduction mechanisms to convert fuel in the environment to autonomous motion. Recent experimental and theoretical studies demonstrate that these autonomous engines can…

Soft Condensed Matter · Physics 2018-02-07 Ali Mozaffari , Nima Sharifi-Mood , Joel Koplik , Charles Maldarelli

We simulate the granular flow in a narrow pipe with a lattice-gas automaton model. We find that the density in the system is characterized by two features. One is that spontaneous density waves propagate through the system with well-defined…

Condensed Matter · Physics 2009-10-22 Gongwen Peng , Hans J. Herrmann
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