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Graph Neural Networks (GNNs) have shown significant success for graph-based tasks. Motivated by the prevalence of large datasets in real-world applications, pooling layers are crucial components of GNNs. By reducing the size of input…

Machine Learning · Computer Science 2026-01-13 Katharina Limbeck , Lydia Mezrag , Guy Wolf , Bastian Rieck

Graph Neural Networks (GNNs) have been widely applied to fraud detection problems in recent years, revealing the suspiciousness of nodes by aggregating their neighborhood information via different relations. However, few prior works have…

Social and Information Networks · Computer Science 2020-08-21 Yingtong Dou , Zhiwei Liu , Li Sun , Yutong Deng , Hao Peng , Philip S. Yu

Recent efforts leverage Large Language Models (LLMs) for modeling text-attributed graph structures in node classification tasks. These approaches describe graph structures for LLMs to understand or aggregate LLM-generated textual attribute…

Computation and Language · Computer Science 2025-05-27 Huachi Zhou , Jiahe Du , Chuang Zhou , Chang Yang , Yilin Xiao , Yuxuan Xie , Xiao Huang

In real-world scientific discovery, human beings always make use of the accumulated prior knowledge with imagination pick select one or a few most promising hypotheses from large and noisy data analysis results. In this study, we introduce…

Machine Learning · Computer Science 2025-01-29 Haoran Song , Jiarui Feng , Guangfu Li , Michael Province , Philip Payne , Yixin Chen , Fuhai Li

Text-Attributed Graphs (TAGs), where each node is associated with text descriptions, are ubiquitous in real-world scenarios. They typically exhibit distinctive structure and domain-specific knowledge, motivating the development of a Graph…

Machine Learning · Computer Science 2025-10-21 Xi Zhu , Haochen Xue , Ziwei Zhao , Wujiang Xu , Jingyuan Huang , Minghao Guo , Qifan Wang , Kaixiong Zhou , Imran Razzak , Yongfeng Zhang

The integration of Large Language Models (LLMs) with Graph Representation Learning (GRL) marks a significant evolution in analyzing complex data structures. This collaboration harnesses the sophisticated linguistic capabilities of LLMs to…

Machine Learning · Computer Science 2024-02-12 Qiheng Mao , Zemin Liu , Chenghao Liu , Zhuo Li , Jianling Sun

GNN-to-MLP distillation aims to utilize knowledge distillation (KD) to learn computationally-efficient multi-layer perceptron (student MLP) on graph data by mimicking the output representations of teacher GNN. Existing methods mainly make…

Machine Learning · Computer Science 2024-03-07 Ling Yang , Ye Tian , Minkai Xu , Zhongyi Liu , Shenda Hong , Wei Qu , Wentao Zhang , Bin Cui , Muhan Zhang , Jure Leskovec

Source code and its accompanying comments are complementary yet naturally aligned modalities-code encodes structural logic while comments capture developer intent. However, existing vulnerability detection methods mostly rely on…

Software Engineering · Computer Science 2026-05-01 Zeming Dong , Yuejun Guo , Qiang Hu , Yao Zhang , Maxime Cordy , Hao Liu , Mike Papadakis , Yongqiang Lyu

Unlike the flow structure of natural languages, programming languages have an inherent rigidity in structure and grammar.However, existing detection methods based on pre-trained models typically treat code as a natural language sequence,…

Software Engineering · Computer Science 2024-11-11 Ziliang Wang , Ge Li , Jia Li , Yihong Dong , Yingfei Xiong , Zhi Jin

The integration of multi-omic data is pivotal for understanding complex diseases, but its high dimensionality and noise present significant challenges. Graph Neural Networks (GNNs) offer a robust framework for analyzing large-scale…

Quantitative Methods · Quantitative Biology 2024-12-23 Heming Zhang , Di Huang , Yixin Chen , Fuhai Li

Graph Neural Networks (GNNs) are recognized as potent tools for processing real-world data organized in graph structures. Especially inductive GNNs, which allow for the processing of graph-structured data without relying on predefined graph…

Machine Learning · Computer Science 2024-11-21 Marcin Podhajski , Jan Dubiński , Franziska Boenisch , Adam Dziedzic , Agnieszka Pregowska , Tomasz P. Michalak

Code vulnerability detection is crucial for ensuring the security and reliability of modern software systems. Recently, Large Language Models (LLMs) have shown promising capabilities in this domain. However, notable discrepancies in…

Software Engineering · Computer Science 2025-09-19 Zhihong Sun , Jia Li , Yao Wan , Chuanyi Li , Hongyu Zhang , Zhi jin , Ge Li , Hong Liu , Chen Lyu , Songlin Hu

Various deep learning-based approaches utilizing pre-trained language models (PLMs) have been proposed for automated vulnerability detection. With recent advancements in large language models (LLMs), several studies have begun exploring…

Software Engineering · Computer Science 2026-03-11 Honglin Shu , Michael Fu , Junji Yu , Dong Wang , Chakkrit Tantithamthavorn , Junjie Chen , Yasutaka Kamei

Using Large Language Models (LLMs) to process graph-structured data is an active research area, yet current state-of-the-art approaches typically rely on multi-step pipelines with Graph Neural Network (GNN) encoders that compress rich…

Machine Learning · Computer Science 2026-05-12 Dario Vajda

Large Language Models (LLMs) have shown promise in tasks like code translation, prompting interest in their potential for automating software vulnerability detection (SVD) and patching (SVP). To further research in this area, establishing a…

Software Engineering · Computer Science 2024-09-18 Arastoo Zibaeirad , Marco Vieira

Deep learning-based approaches, particularly those leveraging pre-trained language models (PLMs), have shown promise in automated software vulnerability detection. However, existing methods are predominantly limited to specific programming…

Software Engineering · Computer Science 2025-05-13 Junji Yu , Honglin Shu , Michael Fu , Dong Wang , Chakkrit Tantithamthavorn , Yasutaka Kamei , Junjie Chen

Graph neural networks (GNNs) are powerful graph-based deep-learning models that have gained significant attention and demonstrated remarkable performance in various domains, including natural language processing, drug discovery, and…

Machine Learning · Computer Science 2023-06-06 Jaykumar Kakkad , Jaspal Jannu , Kartik Sharma , Charu Aggarwal , Sourav Medya

Knowledge distillation (KD) techniques have emerged as a powerful tool for transferring expertise from complex teacher models to lightweight student models, particularly beneficial for deploying high-performance models in…

Machine Learning · Computer Science 2025-10-28 Paul Agbaje , Arkajyoti Mitra , Afia Anjum , Pranali Khose , Ebelechukwu Nwafor , Habeeb Olufowobi

While Graph Neural Networks (GNNs) and Large Language Models (LLMs) are powerful approaches for learning on Text-Attributed Graphs (TAGs), a comprehensive understanding of their robustness remains elusive. Current evaluations are…

Machine Learning · Computer Science 2025-10-21 Runlin Lei , Lu Yi , Mingguo He , Pengyu Qiu , Zhewei Wei , Yongchao Liu , Chuntao Hong

Graph neural networks (GNNs) have been demonstrated to be a powerful algorithmic model in broad application fields for their effectiveness in learning over graphs. To scale GNN training up for large-scale and ever-growing graphs, the most…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-30 Haiyang Lin , Mingyu Yan , Xiaochun Ye , Dongrui Fan , Shirui Pan , Wenguang Chen , Yuan Xie