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Storing and archiving data produced by next-generation sequencing (NGS) is a huge burden for research institutions. Reference-based compression algorithms are effective in dealing with these data. Our work focuses on compressing FASTQ…

Information Theory · Computer Science 2024-04-04 Yuanjian Liu , Huihao Luo , Zhijun Han , Yao Hu , Yehui Yang , Kyle Chard , Sheng Di , Ian Foster , Jiesheng Wu

Large-scale pre-trained language models (LLMs) have demonstrated exceptional performance in various natural language processing (NLP) tasks. However, the massive size of these models poses huge challenges for their deployment in real-world…

Computation and Language · Computer Science 2023-10-25 Jiduan Liu , Jiahao Liu , Qifan Wang , Jingang Wang , Xunliang Cai , Dongyan Zhao , Ran Lucien Wang , Rui Yan

As deep neural networks (DNNs) grow in complexity and size, the resultant increase in communication overhead during distributed training has become a significant bottleneck, challenging the scalability of distributed training systems.…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-13 Haoyu Li , Yuchen Xu , Jiayi Chen , Rohit Dwivedula , Wenfei Wu , Keqiang He , Aditya Akella , Daehyeok Kim

Because of vast volume of data being produced by today's scientific simulations and experiments, lossy data compressor allowing user-controlled loss of accuracy during the compression is a relevant solution for significantly reducing the…

Other Computer Science · Computer Science 2017-11-15 Dingwen Tao , Sheng Di , Hanqi Guo , Zizhong Chen , Franck Cappello

Ensemble methods are among the state-of-the-art predictive modeling approaches. Applied to modern big data, these methods often require a large number of sub-learners, where the complexity of each learner typically grows with the size of…

Machine Learning · Computer Science 2018-10-29 Amichai Painsky , Saharon Rosset

We present a computationally efficient method for compressing a trained neural network without using real data. We break the problem of data-free network compression into independent layer-wise compressions. We show how to efficiently…

Computer Vision and Pattern Recognition · Computer Science 2022-05-23 Maxwell Horton , Yanzi Jin , Ali Farhadi , Mohammad Rastegari

Lossy compressors are increasingly adopted in scientific research, tackling volumes of data from experiments or parallel numerical simulations and facilitating data storage and movement. In contrast with the notion of entropy in lossless…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-16 Robert Underwood , Julie Bessac , David Krasowska , Jon C. Calhoun , Sheng Di , Franck Cappello

We develop the "generalized consistent weighted sampling" (GCWS) for hashing the "powered-GMM" (pGMM) kernel (with a tuning parameter $p$). It turns out that GCWS provides a numerically stable scheme for applying power transformation on the…

Machine Learning · Statistics 2022-01-10 Ping Li , Weijie Zhao

The performance of neural networks improves when more parameters are used. However, the model sizes are constrained by the available on-device memory during training and inference. Although applying techniques like quantization can…

Machine Learning · Computer Science 2024-10-29 Yongchang Hao , Yanshuai Cao , Lili Mou

With the promise of federated learning (FL) to allow for geographically-distributed and highly personalized services, the efficient exchange of model updates between clients and servers becomes crucial. FL, though decentralized, often faces…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-25 Grant Wilkins , Sheng Di , Jon C. Calhoun , Zilinghan Li , Kibaek Kim , Robert Underwood , Richard Mortier , Franck Cappello

Existing error-bounded lossy compression techniques control the pointwise error during compression to guarantee the integrity of the decompressed data. However, they typically do not explicitly preserve the topological features in data.…

Information Theory · Computer Science 2023-07-31 Lin Yan , Xin Liang , Hanqi Guo , Bei Wang

We propose a software framework based on the ideas of the Learning-Compression (LC) algorithm, that allows a user to compress a neural network or other machine learning model using different compression schemes with minimal effort.…

Machine Learning · Computer Science 2020-05-19 Yerlan Idelbayev , Miguel Á. Carreira-Perpiñán

Deep learning-based lossless compression methods offer substantial advantages in compressing medical volumetric images. Nevertheless, many learning-based algorithms encounter a trade-off between practicality and compression performance.…

Image and Video Processing · Electrical Eng. & Systems 2023-11-29 Qianhao Chen , Jietao Chen

Bearing data compression is vital to manage the large volumes of data generated during condition monitoring. In this paper, a novel asymmetrical autoencoder with a lifting wavelet transform (LWT) layer is developed to compress bearing…

Signal Processing · Electrical Eng. & Systems 2025-01-22 Xin Zhu , Ahmet Enis Cetin

The rapid growth of digital data has heightened the demand for efficient lossless compression methods. However, existing algorithms exhibit trade-offs: some achieve high compression ratios, others excel in encoding or decoding speed, and…

Information Theory · Computer Science 2025-10-01 Md. Atiqur Rahman , MM Fazle Rabbi

Model compression has been introduced to reduce the required hardware resources while maintaining the model accuracy. Lots of techniques for model compression, such as pruning, quantization, and low-rank approximation, have been suggested…

Machine Learning · Computer Science 2018-10-31 Dongsoo Lee , Parichay Kapoor , Byeongwook Kim

With ever-increasing volumes of scientific data produced by HPC applications, significantly reducing data size is critical because of limited capacity of storage space and potential bottlenecks on I/O or networks in writing/reading or…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-08 Dingwen Tao , Sheng Di , Xin Liang , Zizhong Chen , Franck Cappello

Model compression has emerged as a mainstream solution to reduce memory usage and computational overhead. This paper presents Group Quantization and Sparse Acceleration (GQSA), a novel compression technique tailored for LLMs. Traditional…

Machine Learning · Computer Science 2025-07-29 Chao Zeng , Songwei Liu , Shu Yang , Fangmin Chen , Lean Fu , Xing Mei

Large scale simulations of complex systems ranging from climate and astrophysics to crowd dynamics, produce routinely petabytes of data and are projected to reach the zettabytes level in the coming decade. These simulations enable…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-20 Panagiotis Hadjidoukas , Fabian Wermelinger

Time series data compression is emerging as an important problem with the growth in IoT devices and sensors. Due to the presence of noise in these datasets, lossy compression can often provide significant compression gains without impacting…

Signal Processing · Electrical Eng. & Systems 2020-01-14 Shubham Chandak , Kedar Tatwawadi , Chengtao Wen , Lingyun Wang , Juan Aparicio , Tsachy Weissman