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The characterization of drug-protein interactions is crucial in the high-throughput screening for drug discovery. The deep learning-based approaches have attracted attention because they can predict drug-protein interactions without…

Machine Learning · Computer Science 2020-12-22 QHwan Kim , Joon-Hyuk Ko , Sunghoon Kim , Nojun Park , Wonho Jhe

We propose Neural Priming, a technique for adapting large pretrained models to distribution shifts and downstream tasks given few or no labeled examples. Presented with class names or unlabeled test samples, Neural Priming enables the model…

Transfer learning is commonly employed to leverage large, pre-trained models and perform fine-tuning for downstream tasks. The most prevalent pre-trained models are initially trained using ImageNet. However, their ability to generalize can…

In this paper we present a technique to train neural network models on small amounts of data. Current methods for training neural networks on small amounts of rich data typically rely on strategies such as fine-tuning a pre-trained neural…

Machine Learning · Computer Science 2016-11-08 Ark Anderson , Kyle Shaffer , Artem Yankov , Court D. Corley , Nathan O. Hodas

We propose a new deep learning approach for medical imaging that copes with the problem of a small training set, the main bottleneck of deep learning, and apply it for classification of healthy and cancer cells acquired by quantitative…

Image and Video Processing · Electrical Eng. & Systems 2018-12-31 Moran Rubin , Omer Stein , Nir A. Turko , Yoav Nygate , Darina Roitshtain , Lidor Karako , Itay Barnea , Raja Giryes , Natan T. Shaked

Strategies for machine-learning(ML)-accelerated discovery that are general across materials composition spaces are essential, but demonstrations of ML have been primarily limited to narrow composition variations. By addressing the scarcity…

Transfer learning is a machine learning technique that uses previously acquired knowledge from a source domain to enhance learning in a target domain by reusing learned weights. This technique is ubiquitous because of its great advantages…

Computer Vision and Pattern Recognition · Computer Science 2026-05-14 Nermeen Abou Baker , Nico Zengeler , Uwe Handmann

The training of molecular models of quantum mechanical properties based on statistical machine learning requires large datasets which exemplify the map from chemical structure to molecular property. Intelligent a priori selection of…

Few-shot learning is challenging due to its very limited data and labels. Recent studies in big transfer (BiT) show that few-shot learning can greatly benefit from pretraining on large scale labeled dataset in a different domain. This paper…

Computer Vision and Pattern Recognition · Computer Science 2020-12-11 Suichan Li , Dongdong Chen , Yinpeng Chen , Lu Yuan , Lei Zhang , Qi Chu , Nenghai Yu

Transfer learning allows us to train deep architectures requiring a large number of learned parameters, even if the amount of available data is limited, by leveraging existing models previously trained for another task. Here we explore the…

Software Engineering · Computer Science 2020-03-04 Natalie Best , Jordan Ott , Erik Linstead

Few-shot classification aims to learn to classify new object categories well using only a few labeled examples. Transferring feature representations from other models is a popular approach for solving few-shot classification problems. In…

Computer Vision and Pattern Recognition · Computer Science 2022-09-07 Chun-Nam Yu , Yi Xie

We proposed the molecular hyper-message passing network (MolHMPN) that predicts the properties of a molecule with prior knowledge-guided subgraph. Modeling higher-order connectivities in molecules is necessary as changes in both the…

Computational Engineering, Finance, and Science · Computer Science 2022-01-05 Fangying Chen , Junyoung Park , Jinkyoo Park

Machine-learning models in chemistry - when based on descriptors of atoms embedded within molecules - face essential challenges in transferring the quality of predictions of local electronic structures and their associated properties across…

Chemical Physics · Physics 2024-09-27 Frederik Ø. Kjeldal , Janus J. Eriksen

Acquiring and training on large-scale labeled data can be impractical due to cost constraints. Additionally, the use of small training datasets can result in considerable variability in model outcomes, overfitting, and learning of spurious…

Machine Learning · Computer Science 2025-07-08 Jiashu Tao , Reza Shokri

Accurate prediction of nuclear magnetic resonance (NMR) chemical shifts is fundamental to spectral analysis and molecular structure elucidation, yet existing machine learning methods rely on limited, labor-intensive atom-assigned datasets.…

Machine Learning · Computer Science 2026-01-27 Yongqi Jin , Yecheng Wang , Jun-jie Wang , Rong Zhu , Guolin Ke , Weinan E

Accurate prediction of material properties facilitates the discovery of novel materials with tailored functionalities. Deep learning models have recently shown superior accuracy and flexibility in capturing structure-property relationships.…

Machine Learning · Computer Science 2025-04-30 Chowdhury Mohammad Abid Rahman , Aldo H. Romero , Prashnna K. Gyawali

Recently, message-passing Neural networks (MPNN) provide a promising tool for dealing with molecular graphs and have achieved remarkable success in facilitating the discovery and materials design with desired properties. However, the…

Materials Science · Physics 2023-07-12 Hai Lan , Xian Wei

The predicament in semi-supervised few-shot learning (SSFSL) is to maximize the value of the extra unlabeled data to boost the few-shot learner. In this paper, we propose a Poisson Transfer Network (PTN) to mine the unlabeled information…

Computer Vision and Pattern Recognition · Computer Science 2021-04-02 Huaxi Huang , Junjie Zhang , Jian Zhang , Qiang Wu , Chang Xu

Recently, there has been great interest in learning how to best represent proteins, specifically with fixed-length embeddings. Deep learning has become a popular tool for protein representation learning as a model's hidden layers produce…

Biomolecules · Quantitative Biology 2020-11-09 Amir Shanehsazzadeh , David Belanger , David Dohan

Language model pre-training has proven to be useful in many language understanding tasks. In this paper, we investigate whether it is still helpful to add the self-training method in the pre-training step and the fine-tuning step. Towards…

Computation and Language · Computer Science 2023-02-17 Tong Guo