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In the past years, many computational methods have been developed to infer the structure of gene regulatory networks from time-series data. However, the applicability and accuracy presumptions of such algorithms remain unclear due to…

Molecular Networks · Quantitative Biology 2019-07-01 Laurent Mombaerts , Atte Aalto , Johan Markdahl , Jorge Goncalves

The inverse problem of supervised reconstruction of depth-variable (time-dependent) parameters in a neural ordinary differential equation (NODE) is considered, that means finding the weights of a residual network with time continuous…

Machine Learning · Computer Science 2022-02-14 George Baravdish , Gabriel Eilertsen , Rym Jaroudi , B. Tomas Johansson , Lukáš Malý , Jonas Unger

Dimension reduction is a common strategy to study non-linear dynamical systems composed by a large number of variables. The goal is to find a smaller version of the system whose time evolution is easier to predict while preserving some of…

Dynamical Systems · Mathematics 2022-06-23 Marina Vegué , Vincent Thibeault , Patrick Desrosiers , Antoine Allard

Due to its time-varying nature, oscillator phase noise can significantly degrade the performance of channel estimation, carrier recovery, and data detection blocks in high-speed wireless communication systems. In this paper, we analyze…

Information Theory · Computer Science 2013-10-01 Rui Wang , Hani Mehrpouyan , Meixia Tao , Yingbo Hua

In this article, we present a method to reconstruct the topology of a partially observed radial network of linear dynamical systems with bi-directional interactions. Our approach exploits the structure of the inverse power spectral density…

Systems and Control · Computer Science 2018-07-13 Saurav Talukdar , Deepjyoti Deka , Michael Chertkov , Murti Salapaka

Machine learning methods have shown great success in various scientific areas, including fluid mechanics. However, reconstruction problems, where full velocity fields must be recovered from partial observations, remain challenging. In this…

Fluid Dynamics · Physics 2025-01-16 Qian Zhang , Dmitry Krotov , George Em Karniadakis

Simulating turbulence is critical for many societally important applications in aerospace engineering, environmental science, the energy industry, and biomedicine. Large eddy simulation (LES) has been widely used as an alternative to direct…

Fluid Dynamics · Physics 2023-12-13 Shengyu Chen , Tianshu Bao , Peyman Givi , Can Zheng , Xiaowei Jia

In contrast to the classical cyclic prefix (CP)-OFDM, the time domain synchronous (TDS)-OFDM employs a known pseudo noise (PN) sequence as guard interval (GI). Conventional channel estimation methods for TDS-OFDM are based on the…

Networking and Internet Architecture · Computer Science 2012-01-04 Ming Liu , Matthieu Crussière , Jean-François Hélard

Recently, a framework for analyzing time series by constructing an associated complex network has attracted significant research interest. One of the advantages of the complex network method for studying time series is that complex network…

Chaotic Dynamics · Physics 2015-06-04 Ruoxi Xiang , Jie Zhang , Xiao-ke Xu , Michael Small

We revisit the classical problem of Fourier-sparse signal reconstruction -- a variant of the \emph{Set Query} problem -- which asks to efficiently reconstruct (a subset of) a $d$-dimensional Fourier-sparse signal ($\|\hat{x}(t)\|_0 \leq…

Data Structures and Algorithms · Computer Science 2023-11-21 Yeqi Gao , Zhao Song , Baocheng Sun , Omri Weinstein , Ruizhe Zhang

A new algorithm is developed to jointly recover a temporal sequence of images from noisy and under-sampled Fourier data. Specifically, we consider the case where each data set is missing vital information that prevents its (individual)…

Numerical Analysis · Mathematics 2022-05-13 Yao Xiao , Jan Glaubitz , Anne Gelb , Guohui Song

This paper studies the estimation of network weights for a class of systems with binary-valued observations. In these systems only quantized observations are available for the network estimation. Furthermore, system states are coupled with…

Systems and Control · Computer Science 2019-03-19 Yu Xing , Xingkang He , Haitao Fang , Karl Henrik Johansson

Inferring networks from observed time series data presents a clear glimpse into the interconnections among nodes. Network inference models, when dealing with real-world open cases, especially in the presence of observational noise,…

Social and Information Networks · Computer Science 2024-05-07 Kai Wu , Yuanyuan Li , Jing Liu

Networks are widely used in many fields for their powerful ability to provide vivid representations of relationships between variables. However, many of them may be corrupted by experimental noise or inappropriate network inference methods…

Molecular Networks · Quantitative Biology 2021-09-21 Jiating Yu , Jiacheng Leng , Ling-Yun Wu

In 1980 and 1981, two pioneering papers laid the foundation for what became known as nonlinear time-series analysis: the analysis of observed data---typically univariate---via dynamical systems theory. Based on the concept of state-space…

Chaotic Dynamics · Physics 2015-06-24 Elizabeth Bradley , Holger Kantz

Common problem in signal processing is reconstruction of the missing signal samples. Missing samples can occur by intentionally omitting signal coefficients to reduce memory requirements, or to speed up the transmission process. Also, noisy…

Information Theory · Computer Science 2015-03-02 Slavoljub Jokić , Ljindita Niković , Jelena Kadović

Samples of dynamic or time-varying networks and other random object data such as time-varying probability distributions are increasingly encountered in modern data analysis. Common methods for time-varying data such as functional data…

Methodology · Statistics 2024-07-23 Paromita Dubey , Hans-Georg Müller

We consider a wireless sensor network, sampling a bandlimited field, described by a limited number of harmonics. Sensor nodes are irregularly deployed over the area of interest or subject to random motion; in addition sensors measurements…

Other Computer Science · Computer Science 2009-11-13 A. Nordio , C. -F. Chiasserini , E. Viterbo

We study recovering a 1D order from a noisy, locally sampled pairwise comparison matrix under a tight query budget. We recast the task as reconstructing a sparse, noisy line graph and present, to our knowledge, the first method that…

Data Structures and Algorithms · Computer Science 2025-11-13 Fuming Yang , Yaron Meirovitch , Jeff W. Lichtman

Networks are universally considered as complex structures of interactions of large multi-component systems. In order to determine the role that each node has inside a complex network, several centrality measures have been developed. Such…

Physics and Society · Physics 2019-08-20 Malbor Asllani , Bruno Requiao da Cunha , Ernesto Estrada , James P. Gleeson
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