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This work combines algorithms based on word embeddings, dimensionality reduction, and clustering. The objective is to obtain topics from a set of unclassified texts. The algorithm to obtain the word embeddings is the BERT model, a neural…

Computation and Language · Computer Science 2023-12-08 Diego Saldaña Ulloa

The extraction and analysis of insights from medical data, primarily stored in free-text formats by healthcare workers, presents significant challenges due to its unstructured nature. Medical coding, a crucial process in healthcare, remains…

Computation and Language · Computer Science 2024-05-28 Mikhail Kulyabin , Gleb Sokolov , Aleksandr Galaida , Andreas Maier , Tomas Arias-Vergara

In this paper, we formulate keyphrase extraction from scholarly articles as a sequence labeling task solved using a BiLSTM-CRF, where the words in the input text are represented using deep contextualized embeddings. We evaluate the proposed…

Recent work on predicting category structure with distributional models, using either static word embeddings (Heyman and Heyman, 2019) or contextualized language models (CLMs) (Misra et al., 2021), report low correlations with human…

Machine Learning · Computer Science 2023-02-15 Joseph Renner , Pascal Denis , Rémi Gilleron , Angèle Brunellière

Unstructured clinical text in EHRs contains crucial information for applications including decision support, trial matching, and retrospective research. Recent work has applied BERT-based models to clinical information extraction and text…

Computation and Language · Computer Science 2020-11-13 Kexin Huang , Sankeerth Garapati , Alexander S. Rich

Text segmentation holds paramount importance in the field of Natural Language Processing (NLP). It plays an important role in several NLP downstream tasks like information retrieval and document summarization. In this work, we propose a new…

Computation and Language · Computer Science 2024-08-30 Majd Saleh , Sarra Baghdadi , Stéphane Paquelet

BERT achieves remarkable results in text classification tasks, it is yet not fully exploited, since only the last layer is used as a representation output for downstream classifiers. The most recent studies on the nature of linguistic…

Computation and Language · Computer Science 2022-09-15 Charaf Eddine Benarab , Shenglin Gui

Predicting the number of citations of scholarly documents is an upcoming task in scholarly document processing. Besides the intrinsic merit of this information, it also has a wider use as an imperfect proxy for quality which has the…

Computation and Language · Computer Science 2020-12-23 Thomas van Dongen , Gideon Maillette de Buy Wenniger , Lambert Schomaker

Contextualized representations from a pre-trained language model are central to achieve a high performance on downstream NLP task. The pre-trained BERT and A Lite BERT (ALBERT) models can be fine-tuned to give state-ofthe-art results in…

Computation and Language · Computer Science 2021-01-27 Hyunjin Choi , Judong Kim , Seongho Joe , Youngjune Gwon

The abstract of a scientific paper distills the contents of the paper into a short paragraph. In the biomedical literature, it is customary to structure an abstract into discourse categories like BACKGROUND, OBJECTIVE, METHOD, RESULT, and…

Computation and Language · Computer Science 2020-05-28 Soumya Banerjee , Debarshi Kumar Sanyal , Samiran Chattopadhyay , Plaban Kumar Bhowmick , Parthapratim Das

Small and imbalanced datasets commonly seen in healthcare represent a challenge when training classifiers based on deep learning models. So motivated, we propose a novel framework based on BioBERT (Bidirectional Encoder Representations from…

Computation and Language · Computer Science 2020-06-23 Shijing Si , Rui Wang , Jedrek Wosik , Hao Zhang , David Dov , Guoyin Wang , Ricardo Henao , Lawrence Carin

Biomedical literature is a rapidly expanding field of science and technology. Classification of biomedical texts is an essential part of biomedicine research, especially in the field of biology. This work proposes the fine-tuned DistilBERT,…

Computation and Language · Computer Science 2024-04-23 Ziqing Guo

Biomedical Named Entity Recognition (NER) is a fundamental task of Biomedical Natural Language Processing for extracting relevant information from biomedical texts, such as clinical records, scientific publications, and electronic health…

Computation and Language · Computer Science 2023-12-27 Fahime Shahrokh , Nasser Ghadiri , Rasoul Samani , Milad Moradi

When searching for information, a human reader first glances over a document, spots relevant sections and then focuses on a few sentences for resolving her intention. However, the high variance of document structure complicates to identify…

Computation and Language · Computer Science 2019-02-14 Sebastian Arnold , Rudolf Schneider , Philippe Cudré-Mauroux , Felix A. Gers , Alexander Löser

This paper presents a new semi-supervised framework with convolutional neural networks (CNNs) for text categorization. Unlike the previous approaches that rely on word embeddings, our method learns embeddings of small text regions from…

Machine Learning · Statistics 2015-11-03 Rie Johnson , Tong Zhang

In this work we focus on fine-tuning a pre-trained BERT model and applying it to patent classification. When applied to large datasets of over two millions patents, our approach outperforms the state of the art by an approach using CNN with…

Computation and Language · Computer Science 2019-07-02 Jieh-Sheng Lee , Jieh Hsiang

We introduce a novel multi-agent collaboration framework designed to enhance the accuracy and robustness of text classification models. Leveraging BERT as the primary classifier, our framework dynamically escalates low-confidence…

Computation and Language · Computer Science 2025-02-27 Hediyeh Baban , Sai A Pidapar , Aashutosh Nema , Sichen Lu

For management, documents are categorized into a specific category, and to do these, most of the organizations use manual labor. In today's automation era, manual efforts on such a task are not justified, and to avoid this, we have so many…

Machine Learning · Computer Science 2020-04-20 Ritu Yadav

This study compares the effectiveness and robustness of multi-class categorization of Amazon product data using transfer learning on pre-trained contextualized language models. Specifically, we fine-tuned BERT and XLNet, two bidirectional…

Machine Learning · Statistics 2019-09-24 Xinyi Liu , Artit Wangperawong

Novel contexts may often arise in complex querying scenarios such as in evidence-based medicine (EBM) involving biomedical literature, that may not explicitly refer to entities or canonical concept forms occurring in any fact- or rule-based…

Computation and Language · Computer Science 2019-11-12 Manirupa Das , Juanxi Li , Eric Fosler-Lussier , Simon Lin , Soheil Moosavinasab , Steve Rust , Yungui Huang , Rajiv Ramnath