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The major uncertainties in studies of the multi-scale structure of the Universe arise not from observational errors but from the variety of legitimate definitions and detection methods for individual structures. To facilitate the study of…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-22 M. J. Way , P. R. Gazis , Jeffrey D. Scargle

Machine learning (ML) strategies are opening the door to faster computer simulations, allowing us to simulate more realistic colloidal systems. Since the interactions in colloidal systems are often highly many-body, stemming from e.g.…

Soft Condensed Matter · Physics 2026-01-09 Rinske M. Alkemade , Rastko Sknepnek , Frank Smallenburg , Laura Filion

Numerous processes across both the physical and biological sciences are driven by diffusion. Partial differential equations (PDEs) are a popular tool for modelling such phenomena deterministically, but it is often necessary to use…

Quantitative Methods · Quantitative Biology 2016-05-25 Paul R. Taylor , Ruth E. Baker , Matthew J. Simpson , Christian A. Yates

Spatial statistical analysis of multivariate volumetric data can be challenging due to scale, complexity, and occlusion. Advances in topological segmentation, feature extraction, and statistical summarization have helped overcome the…

Methodology · Statistics 2022-08-16 Tyson Neuroth , Martin Rieth , Konduri Aditya , Myoungkyu Lee , Jacqueline H Chen , Kwan-Liu Ma

In this work we introduce and analyze a new multiscale method for strongly nonlinear monotone equations in the spirit of the Localized Orthogonal Decomposition. A problem-adapted multiscale space is constructed by solving linear local…

Numerical Analysis · Mathematics 2020-12-16 Barbara Verfürth

Given a countable set of points in a continuous space, Voronoi tessellation is an intuitive way of partitioning the space according to the distance to the individual points. As a powerful approach to obtain structural information, it has a…

Soft Condensed Matter · Physics 2020-02-17 Simeon Völkel , Kai Huang

We present a new numerical scheme to study systems of non-convex, irregular, and punctured particles in an efficient manner. We employ this method to analyze regular packings of odd-shaped bodies, not only from a nanoparticle but also both…

Soft Condensed Matter · Physics 2015-05-28 Joost de Graaf , René van Roij , Marjolein Dijkstra

In present paper we suggest a new universal approach to study complex systems by microscopic, mesoscopic and macroscopic methods. We discuss new possibilities of extracting information on nonstationarity, unsteadiness and non-Markovity of…

Disordered Systems and Neural Networks · Physics 2007-05-23 Renat M. Yulmetyev , Anatolii V. Mokshin , Peter Hänggi

Many methods for modelling spatial processes assume global smoothness properties; such assumptions are often violated in practice. We introduce a method for modelling spatial processes that display heterogeneity or contain discontinuities.…

We use a combination of unsupervised clustering and sparsity-promoting inference algorithms to learn locally dominant force balances that explain macroscopic pattern formation in self-organized active particle systems. The self-organized…

Soft Condensed Matter · Physics 2023-07-28 Dominik Sturm , Suryanarayana Maddu , Ivo F. Sbalzarini

In molecular simulations, efficient methods for investigating equilibration and slow relaxation in dense systems are crucial yet challenging. This study focuses on the diffusional characteristics of monodisperse hard disk systems at…

Soft Condensed Matter · Physics 2024-10-21 Daigo Mugita , Masaharu Isobe

A theory of structure is formulated for systems of many structureless classical particles with stable local interactions in Euclidean space. Such systems are shown to have their structure in thermodynamic equilibrium determined exactly by a…

Statistical Mechanics · Physics 2026-02-12 John Çamkıran , Fabian Parsch , Glenn D. Hibbard

We analyse structure and dynamics in simulated high-concentration hard sphere colloidal suspensions by means of calculations based on the void space. We show that remoteness, a quantity measuring the scale of spaces, is useful in studying…

Soft Condensed Matter · Physics 2007-05-23 M. D. Haw

This study examines the transverse and longitudinal properties of hard disks confined in narrow channels. Employing an exact mapping of the system onto a one-dimensional polydisperse, nonadditive mixture of hard rods with equal chemical…

Soft Condensed Matter · Physics 2024-08-13 Ana M. Montero , Andrés Santos

We explore quantitative descriptors that herald when a many-particle system in $d$-dimensional Euclidean space $\mathbb{R}^d$ approaches a hyperuniform state as a function of the relevant control parameter. We establish quantitative…

Soft Condensed Matter · Physics 2021-05-26 Salvatore Torquato

Structural relaxation in hard-sphere colloidal glasses has been studied using confocal microscopy. The motion of individual particles is followed over long time scales to detect the rearranging regions in the system. We have used normal…

Soft Condensed Matter · Physics 2015-05-30 Antina Ghosh , Vijayakumar Chikkadi , Peter Schall , Daniel Bonn

This paper develops a new continuous approach to a similarity between periodic lattices of ideal crystals. Quantifying a similarity between crystal structures is needed to substantially speed up the Crystal Structure Prediction, because the…

Computational Geometry · Computer Science 2024-09-05 Marco Michele Mosca , Vitaliy Kurlin

In this paper we present a self-contained macroscopic description of diffusive systems interacting with boundary reservoirs and under the action of external fields. The approach is based on simple postulates which are suggested by a wide…

Statistical Mechanics · Physics 2015-12-18 L. Bertini , A. De Sole , D. Gabrielli , G. Jona-Lasinio , C. Landim

Under compressive creep, visco-plastic solids experiencing internal mass transfer processes have been recently proposed to accommodate singular cnoidal wave solutions, as material instabilities at the stationary wave limit. These…

Computational Physics · Physics 2020-08-05 Roberto J. Cier , Thomas Poulet , Sergio Rojas , Victor M. Calo , Manolis Veveakis

By combining computer simulations and a unit cell model approach, we study the apparent bimodality of local structural ordering in a system of confined hard disks. It is shown that a two-dimensional (2D) array of hard disks confined…

Soft Condensed Matter · Physics 2025-04-02 A. Trokhymchuk , T. Bryk , A. Huerta