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In this paper we study a variant of string pattern matching which deals with tuples of strings known as \textit{multi-track strings}. Multi-track strings are a generalisation of strings (or \textit{single-track strings}) that have primarily…

Data Structures and Algorithms · Computer Science 2019-12-02 Carl Barton , Ewan Birney , Tomas Fitzgerald

We revisit the classic combinatorial pattern matching problem of finding a longest common subsequence (LCS). For strings $x$ and $y$ of length $n$, a textbook algorithm solves LCS in time $O(n^2)$, but although much effort has been spent,…

Computational Complexity · Computer Science 2018-03-05 Karl Bringmann , Marvin Künnemann

This paper investigates the natural density and structural relationships within Fibonacci words, the density of a Fibonacci word is $\operatorname{DF}(F_k)=n/(n+m),$ where $m$ denote the number of zeros in a Fibonacci word and $n$ denote…

Combinatorics · Mathematics 2025-10-29 Duaa Abdullah , Jasem Hamoud

An oracle chooses a function $f$ from the set of $n$ bits strings to itself, which is either a randomly chosen permutation or a randomly chosen function. When queried by an $n$-bit string $w$, the oracle computes $f(w)$, truncates the $m$…

Probability · Mathematics 2015-08-04 Shoni Gilboa , Shay Gueron

A border of a string is a non-empty proper prefix of the string that is also a suffix. A string is unbordered if it has no border. The longest unbordered factor is a fundamental notion in stringology, closely related to string periodicity.…

Data Structures and Algorithms · Computer Science 2025-07-23 Shoma Sekizaki , Takuya Mieno

Suppose we are asked to preprocess a string \(s [1..n]\) such that later, given a substring's endpoints, we can quickly count how many distinct characters it contains. In this paper we give a data structure for this problem that takes \(n…

Data Structures and Algorithms · Computer Science 2010-11-16 Travis Gagie , Juha Kärkkäinen

Indexing highly repetitive strings (i.e., strings with many repetitions) for fast queries has become a central research topic in string processing, because it has a wide variety of applications in bioinformatics and natural language…

Data Structures and Algorithms · Computer Science 2021-04-19 Takaaki Nishimoto , Yasuo Tabei

Enumerating characteristic substrings (e.g., maximal repeats, minimal unique substrings, and minimal absent words) in a given string has been an important research topic because there are a wide variety of applications in various areas such…

Data Structures and Algorithms · Computer Science 2021-03-03 Takaaki Nishimoto , Yasuo Tabei

Many words in documents recur very frequently but are essentially meaningless as they are used to join words together in a sentence. It is commonly understood that stop words do not contribute to the context or content of textual documents.…

Information Retrieval · Computer Science 2012-05-30 Murphy Choy

We present a browser application for estimating the number of frequent patterns, in particular itemsets, as well as the pattern frequency spectrum. The pattern frequency spectrum is defined as the function that shows for every value of the…

Databases · Computer Science 2014-10-01 Matthijs van Leeuwen , Antti Ukkonen

A classic data structure problem is to preprocess a string T of length $n$ so that, given a query $q$, we can quickly find all substrings of T with Hamming distance at most $k$ from the query string. Variants of this problem have seen…

Data Structures and Algorithms · Computer Science 2026-04-03 Jackson Bibbens , Levi Borevitz , Samuel McCauley

A weighted string, also known as a position weight matrix, is a sequence of probability distributions over some alphabet. We revisit the Weighted Shortest Common Supersequence (WSCS) problem, introduced by Amir et al. [SPIRE 2011], that is,…

We consider document listing on string collections, that is, finding in which strings a given pattern appears. In particular, we focus on repetitive collections: a collection of size $N$ over alphabet $[1,\sigma]$ is composed of $D$ copies…

Data Structures and Algorithms · Computer Science 2018-11-15 Gonzalo Navarro

Hidden structural patterns in written texts have been subject of considerable research in the last decades. In particular, mapping a text into a time series of sentence lengths is a natural way to investigate text structure. Typically,…

Computation and Language · Computer Science 2018-05-07 Denner S. Vieira , Sergio Picoli , Renio S. Mendes

One of the strengths of traditional convolutional neural networks (CNNs) is their inherent translational invariance. However, for the task of speech enhancement in the time-frequency domain, this property cannot be fully exploited due to a…

Sound · Computer Science 2020-11-10 Koen Oostermeijer , Qing Wang , Jun Du

Network Coding (NC) shows great potential in various communication scenarios through changing the packet forwarding principles of current networks. It can improve not only throughput, latency, reliability and security but also alleviates…

Networking and Internet Architecture · Computer Science 2016-01-14 Dávid Szabó , Attila Csoma , Péter Megyesi , András Gulyás , Frank H. P. Fitzek

In recent years, graph theory has been widely employed to probe several language properties. More specifically, the so-called word adjacency model has been proven useful for tackling several practical problems, especially those relying on…

Computation and Language · Computer Science 2015-03-04 Diego R. Amancio

Most of the attention in statistical compression is given to the space used by the compressed sequence, a problem completely solved with optimal prefix codes. However, in many applications, the storage space used to represent the prefix…

Data Structures and Algorithms · Computer Science 2015-06-30 Travis Gagie , Gonzalo Navarro , Yakov Nekrich , Alberto Ordóñez

We consider the problem of finding, given two documents of total length $n$, a longest string occurring as a substring of both documents. This problem, known as the Longest Common Substring (LCS) problem, has a classic $O(n)$-time solution…

Data Structures and Algorithms · Computer Science 2020-04-29 Stav Ben-Nun , Shay Golan , Tomasz Kociumaka , Matan Kraus

Despite renewed interest in emergent language simulations with neural networks, little is known about the basic properties of the induced code, and how they compare to human language. One fundamental characteristic of the latter, known as…

Computation and Language · Computer Science 2019-10-16 Rahma Chaabouni , Eugene Kharitonov , Emmanuel Dupoux , Marco Baroni