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Active stresses in biological cells and tissues drive many developmental processes. However, increasing experimental evidence suggests that additional mechanical interactions with surrounding material can play a crucial role in guiding…

Soft Condensed Matter · Physics 2026-03-10 Douglas MacMyn Brown , Alexander Mietke

We study the influence of solid boundaries on dynamics and structure of active fluids as the height of the container, $z$, changes. Along the varying dimension, the geometry systematically increases, therefore, the confinement ($z$)…

Soft Condensed Matter · Physics 2021-09-08 Yi Fan , Kun-Ta Wu , Ali Aghvami , Seth Fraden , Kenneth Breuer

In this paper, I consider a thin suspended liquid film, surrounded by a different fluid. Examples of such a system are soap films and liquid crystal films, surrounded by air. They are considered good models for two dimensional fluid…

Fluid Dynamics · Physics 2011-03-25 Doriano Brogioli

A great number of biological organisms live in aqueous environments. Major evolutionary transitions, including the emergence of life itself, likely occurred in such environments. While the chemical aspects of the role of water in biology…

Populations and Evolution · Quantitative Biology 2020-07-01 Madison S. Krieger , Sam Sinai , Martin A. Nowak

We investigate the effect of cooperative interactions in an ensemble of microorganisms, modelled as self-propelled disk-like and rod-like particles, in a three-dimensional turbulent flow to show flocking as an emergent phenomenon. Building…

Soft Condensed Matter · Physics 2020-05-20 Anupam Gupta , Amal Roy , Arnab Saha , Samriddhi Sankar Ray

Hydrodynamic signatures at the Stokes regime, pertinent to motility of micro-swimmers, have a long-range nature. This implies that movements of an object in such a viscosity-dominated regime, can be felt tens of body-lengths away and…

Fluid Dynamics · Physics 2020-10-07 Mehdi Mirzakhanloo , Soheil Esmaeilzadeh , Mohammad-Reza Alam

Through Monte Carlo simulations and the Associating Lattice Gas Model, the phases of a two-dimensional fluid under hydrophilic confinement are evaluated. The model, in its unconfined version, reproduces the anomalous behavior of water…

We study the autophoretic motion of a spherical active particle interacting chemically and hydrodynamically with its fluctuating environment in the limit of rapid diffusion and slow viscous flow. Then, the chemical and hydrodynamic fields…

Soft Condensed Matter · Physics 2024-11-04 Günther Turk , Ronojoy Adhikari , Rajesh Singh

The nature of emergent collective behaviors of moving physical agents interacting with their neighborhood is a long-standing open issue in physical and biological systems alike. This calls for studies on the control of synchronization and…

Statistical Mechanics · Physics 2017-08-11 Tirthankar Banerjee , Abhik Basu

The dynamics of active viscoelastic surfaces plays an important role in biological systems. One prominent example is the actin cortex, a thin bio-polymer sheet underneath the outer membrane of biological cells which combines active…

Active matter systems such as eukaryotic cells and bacteria continuously transform chemical energy to motion. Hence living systems exert active stresses on the complex environments in which they reside. One recurring aspect of this…

Soft Condensed Matter · Physics 2020-02-27 Emmanuel Lance Christopher VI M. Plan , Julia Yeomans , Amin Doostmohammadi

Incorporating the inherent heterogeneity of living systems into models of active nematics is essential to provide a more realistic description of biological processes such as bacterial growth, cell dynamics and tissue development.…

Soft Condensed Matter · Physics 2024-11-06 Alexander J. H. Houston , Nigel J. Mottram

Confinement can modify the dynamics, the thermodynamics and the structural properties of liquid water, the prototypical anomalous liquid. By considering a general anomalous liquid, suitable for globular proteins, colloids or liquid metals,…

Soft Condensed Matter · Physics 2015-06-19 Fabio Leoni , Giancarlo Franzese

The ocean is teeming with a myriad of mm-sized invertebrate planktonic larvae, which thrive in a viscous fluid environment. Many of them rely on ciliary beating to generate fluid flows for locomotion and feeding. Their larval forms, local…

To make progress towards the development of a theory on the motion of inclusions in thin structured films and membranes, we here consider as an initial step a circular disk in a two-dimensional, uniaxially anisotropic fluid layer. We assume…

Soft Condensed Matter · Physics 2024-09-02 Abdallah Daddi-Moussa-Ider , Elsen Tjhung , Thomas Richter , Andreas M. Menzel

A theoretical analysis of surface fluctuations of a freely standing thermotropic smectic-A liquid crystal film is provided, including the effects of viscous hydrodynamics. We find two surface dynamic modes (undulation and peristaltic). For…

Soft Condensed Matter · Physics 2009-10-30 Hsuan-Yi Chen , David Jasnow

We study the dynamics of elastic interfaces-membranes-immersed in thermally excited fluids. The work contains three components: the development of a numerical method, a purely theoretical approach, and numerical simulation. In developing a…

Soft Condensed Matter · Physics 2009-10-31 Davide Stelitano , Daniel H. Rothman

Different hypotheses have been proposed to explain the mechanism for the extremely low friction coefficient of carbon coatings and its undesired dependence on air humidity. A decisive atomistic insight is still lacking because of the…

Mesoscale and Nanoscale Physics · Physics 2016-05-04 Seiji Kajita , Maria Clelia Righi

Geometric confinements are frequently encountered in the biological world and strongly affect the stability, topology, and transport properties of active suspensions in viscous flow. Based on a far-field analytical model, the…

Several meters below the coastal ocean surface there are areas of high ecological activity that contain thin layers of concentrated motile phytoplankton. Gyrotactic trapping has been proposed as a potential mechanism for layer formation of…

Fluid Dynamics · Physics 2019-05-22 Smitha Maretvadakethope , Eric E. Keaveny , Yongyun Hwang
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