Related papers: Frogs, hats and common subsequences
In a complete graph $K_n$ with edge weights drawn independently from a uniform distribution $U(0,1)$ (or alternatively an exponential distribution $\operatorname{Exp}(1)$), let $T_1$ be the MST (the spanning tree of minimum weight) and let…
The enormous increase of popularity and use of the WWW has led in the recent years to important changes in the ways people communicate. An interesting example of this fact is provided by the now very popular social annotation systems,…
The Random First Order Transition Theory (RFOT) predicts that transport proceeds by cooperative movement of particles in domains whose sizes increase as a liquid is compressed above a characteristic volume fraction, $\phi_d$. The rounded…
It is well-known that checking whether a given string $w$ matches a given regular expression $r$ can be done in quadratic time $O(|w|\cdot |r|)$ and that this cannot be improved to a truly subquadratic running time of $O((|w|\cdot…
The frog model is a system of interacting random walks. Initially, there is one particle at each vertex of a connected graph $\mathcal{G}$. All particles are inactive at time zero, except for the one which is placed at the root of…
In this work, we consider the problem of pattern matching under the dynamic time warping (DTW) distance motivated by potential applications in the analysis of biological data produced by the third generation sequencing. To measure the DTW…
We study the dynamic membership problem for regular languages: fix a language L, read a word w, build in time O(|w|) a data structure indicating if w is in L, and maintain this structure efficiently under letter substitutions on w. We…
The solutions of the Wigner-transformed time-dependent Hartree--Fock--Bogoliubov equations are studied in the constant-$\Delta$ approximation. This approximation is known to violate particle-number conservation. As a consequence, the…
Let $A_q$ be a $q$-letter alphabet and $w$ be a right infinite word on this alphabet. A subword of $w$ is a block of consecutive letters of $w$. The subword complexity function of $w$ assigns to each positive integer $n$ the number $f_w(n)$…
We consider the dynamics of a one-dimensional system consisting of dissimilar hardcore interacting (bouncy) random walkers. The walkers' (diffusing particles') friction constants xi_n, where n labels different bouncy walkers, are drawn from…
The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…
The physics of glass has been a significant topic of interest for decades. Dynamical facilitation is widely believed to be an important characteristic of glassy dynamics, but the precise mechanism is still under debate. We propose a lattice…
We treat here the interrelation between formal languages and those dynamical systems that can be described by cellular automata (CA). There is a well-known injective map which identifies any CA-invariant subshift with a central formal…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…
In this paper, we present the following results: (1) We propose a new \emph{dynamic compressed index} of $O(w)$ space, that supports searching for a pattern $P$ in the current text in $O(|P| f(M,w) + \log w \log |P| \log^* M (\log N + \log…
Many astronomical phenomena, including Fast Radio Bursts and Soft Gamma Repeaters, consist of brief, separated, seemingly aperiodic events. The intervals between these events vary randomly, but there are epochs of greater activity, with…
Given a random text over a finite alphabet, we study the frequencies at which fixed-length words occur as subsequences. As the data size grows, the joint distribution of word counts exhibits a rich asymptotic structure. We investigate all…
Let $w$ be a string of length $n$. The problem of counting factors crossing a position - Problem 64 from the textbook ``125 Problems in Text Algorithms'' [Crochemore, Leqroc, and Rytter, 2021], asks to count the number $\mathcal{C}(w,k)$…
The asynchronous automaton associated with a Boolean network $f:\{0,1\}^n\to\{0,1\}^n$ is considered in many applications. It is the finite deterministic automaton with set of states $\{0,1\}^n$, alphabet $\{1,\dots,n\}$, where the action…
The probabilistic Waring problem for finite simple groups asks whether every word of the form $w_1w_2$, where $w_1$ and $w_2$ are non-trivial words in disjoint sets of variables, induces almost uniform distribution on finite simple groups…