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Generating a novel and optimized molecule with desired chemical properties is an essential part of the drug discovery process. Failure to meet one of the required properties can frequently lead to failure in a clinical test which is costly.…

Machine Learning · Computer Science 2020-10-28 Bonggun Shin , Sungsoo Park , JinYeong Bak , Joyce C. Ho

The emerging research paradigm coined as multitasking optimization aims to solve multiple optimization tasks concurrently by means of a single search process. For this purpose, the exploitation of complementarities among the tasks to be…

Artificial Intelligence · Computer Science 2020-05-14 Eneko Osaba , Aritz D. Martinez , Akemi Galvez , Andres Iglesias , Javier Del Ser

Problem solving (e.g., drug design, traffic engineering, software development) by task forces represents a substantial portion of the economy of developed countries. Here we use an agent-based model of cooperative problem solving systems to…

Multiagent Systems · Computer Science 2016-02-23 José F. Fontanari

Molecular discovery, when formulated as an optimization problem, presents significant computational challenges because optimization objectives can be non-differentiable. Evolutionary Algorithms (EAs), often used to optimize black-box…

Automatically tuning software configuration for optimizing a single performance attribute (e.g., minimizing latency) is not trivial, due to the nature of the configuration systems (e.g., complex landscape and expensive measurement). To deal…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-03 Tao Chen , Miqing Li

This paper aims to predict optimal solutions for combinatorial optimization problems (COPs) via machine learning (ML). To find high-quality solutions efficiently, existing work uses a ML prediction of the optimal solution to guide heuristic…

Optimization and Control · Mathematics 2023-01-30 Yunzhuang Shen , Yuan Sun , Xiaodong Li , Andrew Eberhard , Andreas Ernst

In this paper, we present a polynomial-sized linear programming formulation of the Traveling Salesman Problem (TSP). The proposed linear program is a network flow-based model. Numerical implementation issues and results are discussed. (The…

Computational Complexity · Computer Science 2014-07-11 Moustapha Diaby

The answers to many unsolved problems lie in the intractable chemical space of molecules and materials. Machine learning techniques are rapidly growing in popularity as a way to compress and explore chemical space efficiently. One of the…

Chemical Physics · Physics 2020-01-06 John E. Herr , Kevin Koh , Kun Yao , John Parkhill

The $k$-opt algorithm is one of the simplest and most widely used heuristics for solving the traveling salesman problem. Starting from an arbitrary tour, the $k$-opt algorithm improves the current tour in each iteration by exchanging up to…

Data Structures and Algorithms · Computer Science 2025-07-17 Sophia Heimann , Hung P. Hoang , Stefan Hougardy

Evolutionary algorithms usually explore a search space of solutions by means of crossover and mutation. While a mutation consists of a small, local modification of a solution, crossover mixes the genetic information of two solutions to…

Neural and Evolutionary Computing · Computer Science 2022-08-24 Henri Thölke , Jens Kosiol

For solving combinatorial optimisation problems with metaheuristics, different search operators are applied for sampling new solutions in the neighbourhood of a given solution. It is important to understand the relationship between…

Artificial Intelligence · Computer Science 2023-05-05 Jiyuan Pei , Hao Tong , Jialin Liu , Yi Mei , Xin Yao

Contextual policy search allows adapting robotic movement primitives to different situations. For instance, a locomotion primitive might be adapted to different terrain inclinations or desired walking speeds. Such an adaptation is often…

Machine Learning · Statistics 2015-11-17 Jan Hendrik Metzen

Combinatorial optimization problems are typically NP-hard, and thus very challenging to solve. In this paper, we present the random key cuckoo search (RKCS) algorithm for solving the famous Travelling Salesman Problem (TSP). We used a…

Neural and Evolutionary Computing · Computer Science 2016-07-18 Aziz Ouaarab , B. Ahiod , Xin-She Yang

From a multi-model compression perspective, model merging enables memory-efficient serving of multiple models fine-tuned from the same base, but suffers from degraded performance due to interference among their task-specific parameter…

Machine Learning · Computer Science 2025-05-19 Hangyu Zhou , Aaron Gokaslan , Volodymyr Kuleshov , Bharath Hariharan

The hyperfine transitions of the ground-rotational state of the hydroxyl radical (OH) have emerged as a versatile tracer of the diffuse molecular interstellar medium. We present a novel automated Gaussian decomposition algorithm designed…

Instrumentation and Methods for Astrophysics · Physics 2022-01-05 Anita Petzler , Joanne R Dawson , Mark Wardle

Any process in which competing solutions replicate with errors and numbers of their copies depend on their respective fitnesses is the evolutionary optimization process. As during carcinogenesis mutated genomes replicate according to their…

Populations and Evolution · Quantitative Biology 2009-12-15 B. Brutovsky , D. Horvath

Bayesian optimization (BO) is a powerful black-box optimization framework that looks to efficiently learn the global optimum of an unknown system by systematically trading-off between exploration and exploitation. However, the use of BO as…

Optimization and Control · Mathematics 2023-03-28 Dinesh Krishnamoorthy , Joel A. Paulson

This paper introduces Patched MOA (Mixture of Agents), an inference optimization technique that significantly enhances the performance of large language models (LLMs) across diverse software development tasks. We evaluate three inference…

Software Engineering · Computer Science 2025-05-01 Asankhaya Sharma

This paper presents a set of new formulations for the Flying Sidekick Traveling Salesman Problem, where a truck and a drone cooperate to delivery parcels to customers minimizing the completion time. The new formulations improve the results…

Optimization and Control · Mathematics 2022-10-31 Mauro Dell'Amico , Roberto Montemanni , Stefano Novellani

The "0-1 knapsack problem" stands as a classical combinatorial optimization conundrum, necessitating the selection of a subset of items from a given set. Each item possesses inherent values and weights, and the primary objective is to…

Neural and Evolutionary Computing · Computer Science 2024-02-20 Mohammad Saleh Vahdatpour