Related papers: Bounded Edit Distance: Optimal Static and Dynamic …

Buffer insertion is a popular technique to reduce the interconnect delay. The classic buffer insertion algorithm of van Ginneken has time complexity O(n^2), where n is the number of buffer positions. Lillis, Cheng and Lin extended van…

We consider the classic problem of computing the Longest Common Subsequence (LCS) of two strings of length $n$. While a simple quadratic algorithm has been known for the problem for more than 40 years, no faster algorithm has been found…

Computing the winning set for B{\"u}chi objectives in alternating games on graphs is a central problem in computer aided verification with a large number of applications. The long standing best known upper bound for solving the problem is…

This paper describes novel and fast, simple and robust algorithm with O(N) expected complexity which enables to decrease run-time needed to find an exact maximum distance of two points in E2. The proposed algorithm has been evaluated…

In this work, we provide faster algorithms for approximating the optimal transport distance, e.g. earth mover's distance, between two discrete probability distributions $\mu, \nu \in \Delta^n$. Given a cost function $C : [n] \times [n] \to…

Almost 30 years ago, Zhang and Shasha (1989) published a seminal paper describing an efficient dynamic programming algorithm computing the tree edit distance, that is, the minimum number of node deletions, insertions, and replacements that…

We develop simple and general techniques to obtain faster (near-linear time) static approximation algorithms, as well as efficient dynamic data structures, for four fundamental geometric optimization problems: minimum piercing set (MPS),…

Compressed indexing is a powerful technique that enables efficient querying over data stored in compressed form, significantly reducing memory usage and often accelerating computation. While extensive progress has been made for…

Burrows-Wheeler transform (BWT) is an invertible text transformation that, given a text $T$ of length $n$, permutes its symbols according to the lexicographic order of suffixes of $T$. BWT is one of the most heavily studied algorithms in…

Dynamically maintaining the minimum cut in a graph $G$ under edge insertions and deletions is a fundamental problem in dynamic graph algorithms for which no conditional lower bound on the time per operation exists. In an $n$-node graph the…

We consider the problem of designing sublinear time algorithms for estimating the cost of a minimum metric traveling salesman (TSP) tour. Specifically, given access to a $n \times n$ distance matrix $D$ that specifies pairwise distances…

In the {\em distributed all-pairs shortest paths} problem (APSP), every node in the weighted undirected distributed network (the CONGEST model) needs to know the distance from every other node using least number of communication rounds…

In the \emph{$k$-Diameter-Optimally Augmenting Tree Problem} we are given a tree $T$ of $n$ vertices as input. The tree is embedded in an unknown \emph{metric} space and we have unlimited access to an oracle that, given two distinct…

The first fully dynamic algorithm for maintaining a maximal independent set (MIS) with update time that is sublinear in the number of edges was presented recently by the authors of this paper [Assadi et.al. STOC'18]. The algorithm is…

We study the classic Text-to-Pattern Hamming Distances problem: given a pattern $P$ of length $m$ and a text $T$ of length $n$, both over a polynomial-size alphabet, compute the Hamming distance between $P$ and $T[i\, .\, . \, i+m-1]$ for…

We show that the edit distance between two strings of length $n$ can be computed within a factor of $f(\epsilon)$ in $n^{1+\epsilon}$ time as long as the edit distance is at least $n^{1-\delta}$ for some $\delta(\epsilon) > 0$.

The standard algorithm for Levenshtein distance, treats trailing whitespace the same as any other letter or symbol. However, when humans compare 2 strings, we implicitly assume that both strings are padded by infinite trailing whitespace.…

Optimal transportation, or computing the Wasserstein or ``earth mover's'' distance between two distributions, is a fundamental primitive which arises in many learning and statistical settings. We give an algorithm which solves this problem…

The classic exact pattern matching problem, given two strings -- a pattern $P$ of length $m$ and a text $T$ of length $n$ -- asks whether $P$ occurs as a substring of $T$. A property tester for the problem needs to distinguish (with high…

Computing optimal transport (OT) distances such as the earth mover's distance is a fundamental problem in machine learning, statistics, and computer vision. In this paper, we study the problem of approximating the general OT distance…