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We consider the problem of learning the underlying causal structure among a set of variables, which are assumed to follow a Bayesian network or, more specifically, a linear recursive structural equation model (SEM) with the associated…

Statistics Theory · Mathematics 2025-08-05 Anamitra Chaudhuri , Anirban Bhattacharya , Yang Ni

Real-world complex systems are often modelled by sets of equations with endogenous and exogenous variables. What can we say about the causal and probabilistic aspects of variables that appear in these equations without explicitly solving…

Artificial Intelligence · Computer Science 2021-11-25 Tineke Blom , Mirthe M. van Diepen , Joris M. Mooij

For general non-Gaussian distributions, the covariance and precision matrices do not encode the independence structure of the variables, as they do for the multivariate Gaussian. This paper builds on previous work to show that for a class…

Machine Learning · Computer Science 2025-08-18 Ujas Shah , Manuel Lladser , Rebecca Morrison

Gaussian graphical models typically assume a homogeneous structure across all subjects, which is often restrictive in applications. In this article, we propose a weighted pseudo-likelihood approach for graphical modeling which allows…

Methodology · Statistics 2023-03-17 Sutanoy Dasgupta , Peng Zhao , Jacob Helwig , Prasenjit Ghosh , Debdeep Pati , Bani K. Mallick

Causal inference quantifies cause-effect relationships by estimating counterfactual parameters from data. This entails using \emph{identification theory} to establish a link between counterfactual parameters of interest and distributions…

Machine Learning · Statistics 2020-04-17 Jaron J. R. Lee , Ilya Shpitser

Causal discovery methods seek to identify causal relations between random variables from purely observational data, as opposed to actively collected experimental data where an experimenter intervenes on a subset of correlates. One of the…

Machine Learning · Computer Science 2021-02-08 Samir Wadhwa , Roy Dong

A growing family of approaches to causal inference rely on Bayesian formulations of assumptions that go beyond causal graph structure. For example, Bayesian approaches have been developed for analyzing instrumental variable designs,…

Machine Learning · Computer Science 2022-11-01 Sam Witty , David Jensen , Vikash Mansinghka

A causal model is an abstract representation of a physical system as a directed acyclic graph (DAG), where the statistical dependencies are encoded using a graphical criterion called `d-separation'. Recent work by Wood & Spekkens shows that…

Quantum Physics · Physics 2015-08-10 Jacques Pienaar , Caslav Brukner

Causal structure learning with data from multiple contexts carries both opportunities and challenges. Opportunities arise from considering shared and context-specific causal graphs enabling to generalize and transfer causal knowledge across…

Machine Learning · Computer Science 2024-10-29 Martin Rabel , Wiebke Günther , Jakob Runge , Andreas Gerhardus

Lattice Conditional Independence models are a class of models developed first for the Gaussian case in which a distributive lattice classifies all the conditional independence statements. The main result is that these models can…

Statistics Theory · Mathematics 2022-06-14 Peter Caines , Fatemeh Mohammadi , Eduardo Sáenz de Cabezón , Henry Wynn

Most causal inference algorithms in the literature (e.g., Pearl (2000), Spirtes et al. (2000), Heckerman et al. (1999)) exploit an assumption usually referred to as the causal Faithfulness or Stability condition. In this paper, we highlight…

Artificial Intelligence · Computer Science 2012-07-02 Joseph Ramsey , Jiji Zhang , Peter L. Spirtes

Real-world problems, for example in climate applications, often require causal reasoning on spatially gridded time series data or data with comparable structure. While the underlying system is often believed to behave similarly at different…

Machine Learning · Computer Science 2026-02-16 Martin Rabel , Jakob Runge

Gene regulatory network inference (GRNI) is a challenging problem, particularly owing to the presence of zeros in single-cell RNA sequencing data: some are biological zeros representing no gene expression, while some others are technical…

Quantitative Methods · Quantitative Biology 2024-03-26 Haoyue Dai , Ignavier Ng , Gongxu Luo , Peter Spirtes , Petar Stojanov , Kun Zhang

Difference-in-differences (DID) is popular because it can allow for unmeasured confounding when the key assumption of parallel trends holds. However, there exists little guidance on how to decide a priori whether this assumption is…

Methodology · Statistics 2025-05-07 Audrey Renson , Oliver Dukes , Zach Shahn

This paper clarifies a fundamental difference between causal inference and traditional statistical inference by formalizing a mathematical distinction between their respective parameters. We connect two major approaches to causal inference,…

Methodology · Statistics 2025-08-29 Muye Liu , Jun Xie

Graphical models are widely used in diverse application domains to model the conditional dependencies amongst a collection of random variables. In this paper, we consider settings where the graph structure is covariate-dependent, and…

Machine Learning · Statistics 2025-04-24 Jiahe Lin , Yikai Zhang , George Michailidis

Graphical models describe associations between variables through the notion of conditional independence. Gaussian graphical models are a widely used class of such models where the relationships are formalized by non-null entries of the…

Methodology · Statistics 2023-08-08 Sagnik Bhadury , Riten Mitra , Jeremy T. Gaskins

The paper introduces a novel conditional independence (CI) based method for linear and nonlinear, lagged and contemporaneous causal discovery from observational time series in the causally sufficient case. Existing CI-based methods such as…

Methodology · Statistics 2022-01-07 Jakob Runge

We develop a category-theoretic criterion for determining the equivalence of causal models having different but homomorphic directed acyclic graphs over discrete variables. Following Jacobs et al. (2019), we define a causal model as a…

Machine Learning · Computer Science 2022-01-19 Jun Otsuka , Hayato Saigo

We extend the theory of d-separation to cases in which data instances are not independent and identically distributed. We show that applying the rules of d-separation directly to the structure of probabilistic models of relational data…

Artificial Intelligence · Computer Science 2014-01-07 Marc Maier , Katerina Marazopoulou , David Jensen
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