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Graph Attention Networks (GATs) are the state-of-the-art neural architecture for representation learning with graphs. GATs learn attention functions that assign weights to nodes so that different nodes have different influences in the…

Machine Learning · Computer Science 2019-10-29 Guangtao Wang , Rex Ying , Jing Huang , Jure Leskovec

Message Passing Neural Networks (MPNNs) are a class of Graph Neural Networks (GNNs) that propagate information across the graph via local neighborhoods. The scheme gives rise to two key challenges: over-smoothing and over-squashing. While…

Machine Learning · Computer Science 2025-05-30 Jasraj Singh , Keyue Jiang , Brooks Paige , Laura Toni

Graph Neural Networks (GNNs) perform computations on graphs by routing the signal between graph regions using a graph shift operator or a message passing scheme. Often, the propagation of the signal leads to a loss of information, where the…

Machine Learning · Computer Science 2026-05-14 Eden Nagar , Ya-Wei Eileen Lin , Ron Levie

Over-smoothing and over-squashing have been extensively studied in the literature on Graph Neural Networks (GNNs) over the past years. We challenge this prevailing focus in GNN research, arguing that these phenomena are less critical for…

Machine Learning · Statistics 2026-01-13 Niklas Kormann , Benjamin Doerr , Johannes F. Lutzeyer

The over-smoothing problem is an obstacle of developing deep graph neural network (GNN). Although many approaches to improve the over-smoothing problem have been proposed, there is still a lack of comprehensive understanding and conclusion…

Machine Learning · Computer Science 2023-03-02 Weichen Zhao , Chenguang Wang , Congying Han , Tiande Guo

In this paper, we study the factors that contribute to the effect of oversmoothing in deep Graph Neural Networks (GNNs). Specifically, our analysis is based on a new metric (Mean Average Squared Distance - $MASED$) to quantify the extent of…

Machine Learning · Computer Science 2025-10-08 Dimitrios Kelesis , Dimitris Fotakis , Georgios Paliouras

Graph neural networks (GNNs) manifest pathologies including over-smoothing and limited discriminating power as a result of suboptimally expressive aggregating mechanisms. We herein present a unifying framework for stochastic aggregation…

Machine Learning · Statistics 2021-03-01 Yuanqing Wang , Theofanis Karaletsos

Graph convolutional networks (GCNs) have achieved promising performance on various graph-based tasks. However they suffer from over-smoothing when stacking more layers. In this paper, we present a quantitative study on this observation and…

Machine Learning · Computer Science 2020-09-28 Hongwei Zhang , Tijin Yan , Zenjun Xie , Yuanqing Xia , Yuan Zhang

In node classification tasks, graph convolutional neural networks (GCNs) have demonstrated competitive performance over traditional methods on diverse graph data. However, it is known that the performance of GCNs degrades with increasing…

Machine Learning · Computer Science 2022-11-29 Yujun Yan , Milad Hashemi , Kevin Swersky , Yaoqing Yang , Danai Koutra

Graph neural networks (GNNs), which learn the representation of a node by aggregating its neighbors, have become an effective computational tool in downstream applications. Over-smoothing is one of the key issues which limit the performance…

Machine Learning · Computer Science 2020-06-15 Kaixiong Zhou , Xiao Huang , Yuening Li , Daochen Zha , Rui Chen , Xia Hu

Message passing neural networks have shown a lot of success on graph-structured data. However, there are many instances where message passing can lead to over-smoothing or fail when neighboring nodes belong to different classes. In this…

We analyze graph smoothing with \emph{mean aggregation}, where each node successively receives the average of the features of its neighbors. Indeed, it has quickly been observed that Graph Neural Networks (GNNs), which generally follow some…

Machine Learning · Statistics 2022-10-11 Nicolas Keriven

One surprising trait of neural networks is the extent to which their connections can be pruned with little to no effect on accuracy. But when we cross a critical level of parameter sparsity, pruning any further leads to a sudden drop in…

Machine Learning · Computer Science 2023-01-20 Junyang Cai , Khai-Nguyen Nguyen , Nishant Shrestha , Aidan Good , Ruisen Tu , Xin Yu , Shandian Zhe , Thiago Serra

Most graph neural networks follow the message passing mechanism. However, it faces the over-smoothing problem when multiple times of message passing is applied to a graph, causing indistinguishable node representations and prevents the…

Machine Learning · Computer Science 2023-02-06 Yunchong Song , Chenghu Zhou , Xinbing Wang , Zhouhan Lin

Recent works have investigated the role of graph bottlenecks in preventing long-range information propagation in message-passing graph neural networks, causing the so-called `over-squashing' phenomenon. As a remedy, graph rewiring…

Machine Learning · Computer Science 2022-12-14 Domenico Tortorella , Alessio Micheli

Since the proposal of the graph neural network (GNN) by Gori et al. (2005) and Scarselli et al. (2008), one of the major problems in training GNNs was their struggle to propagate information between distant nodes in the graph. We propose a…

Machine Learning · Computer Science 2021-03-10 Uri Alon , Eran Yahav

Graph neural networks (GNNs) are a powerful solution for various structure learning applications due to their strong representation capabilities for graph data. However, traditional GNNs, relying on message-passing mechanisms that gather…

Machine Learning · Computer Science 2024-03-19 Wei Duan , Jie Lu , Yu Guang Wang , Junyu Xuan

Existing approaches for graph neural networks commonly suffer from the oversmoothing issue, regardless of how neighborhoods are aggregated. Most methods also focus on transductive scenarios for fixed graphs, leading to poor generalization…

Machine Learning · Computer Science 2020-06-25 Kyuyong Shin , Wonyoung Shin , Jung-Woo Ha , Sunyoung Kwon

Graph Neural Networks (GNNs) had been demonstrated to be inherently susceptible to the problems of over-smoothing and over-squashing. These issues prohibit the ability of GNNs to model complex graph interactions by limiting their…

Machine Learning · Computer Science 2023-06-01 Khang Nguyen , Hieu Nong , Vinh Nguyen , Nhat Ho , Stanley Osher , Tan Nguyen

Graphs are central to modeling complex systems in domains such as social networks, molecular chemistry, and neuroscience. While Graph Neural Networks, particularly Graph Convolutional Networks, have become standard tools for graph learning,…

Machine Learning · Computer Science 2025-11-03 Angelica Liguori , Ettore Ritacco , Pietro Sabatino , Annalisa Socievole