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Bacteria exist in a free-swimming state or in a sessile biofilm state. The transition from free-swimming to sessile mode is characterized by changes in gene expression which alter, among others,the mechanics of flagellar motility. In this…

Fluid Dynamics · Physics 2014-05-07 Alan Cheng Hou Tsang , Eva Kanso

We numerically study confined channel foam flow around an obstacle using a two-dimensional bubble model, inspired by experiments performed in the same geometry. We systematically vary the polydispersity, the external driving force, and the…

Soft Condensed Matter · Physics 2026-03-24 Bahaa Mazloum , Alexandre Stepanetz , Benjamin Dollet , Misaki Ozawa

Multi-flagellated bacteria utilize the hydrodynamic interaction between their filamentary tails, known as flagella, to swim and change their swimming direction in low Reynolds number flow. This interaction, referred to as bundling and…

Robotics · Computer Science 2023-07-04 Zhuonan Hao , Sangmin Lim , M. Khalid Jawed

Flagellated bacteria exploiting helical propulsion are known to swim along circular trajectories near surfaces. Fluid dynamics predicts this circular motion to be clockwise (CW) above a rigid surface (when viewed from inside the fluid) and…

Biological Physics · Physics 2014-07-18 Diego Lopez , Eric Lauga

Filaments are ubiquitous within the microscopic world. They occur frequently in both biological and industrial environments and display varied and rich dynamics. Their wide range of applications has spurred the development of a special…

Fluid Dynamics · Physics 2023-03-31 Lyndon Koens , Benjamin J. Walker

Colloidal particles that are confined to an interface such as the air-water interface are an example of a two-dimensional fluid. Such dispersions have been observed to spontaneously form cluster and stripe morphologies in certain systems…

Soft Condensed Matter · Physics 2008-09-17 A. J. Archer

We discuss the locomotion of a three-sphere microswimmer in a viscoelastic structured fluid characterized by typical length and time scales. We derive a general expression to link the average swimming velocity to the sphere mobilities. In…

Soft Condensed Matter · Physics 2018-08-30 Kento Yasuda , Ryuichi Okamoto , Shigeyuki Komura

The flagellated bacterium Escherichia coli is increasingly used experimentally as a self-propelled swimmer. To obtain meaningful, quantitative results that are comparable between different laboratories, reproducible protocols are needed to…

We use Stokesian Dynamics simulations to study the microscopic motion of particles suspended in fluids passing through porous media. We construct model porous media with fixed spherical particles, and allow mobile ones to move through this…

Disordered Systems and Neural Networks · Physics 2009-10-31 Jysoo Lee , Joel Koplik

Flagellated bacteria are hydrodynamically attracted to rigid walls, yet past work shows a 'hovering' state where they swim stably at a finite height above surfaces. We use numerics and theory to reveal the physical origin of hovering.…

Biological Physics · Physics 2024-09-17 Pyae Hein Htet , Debasish Das , Eric Lauga

We study the linearized hydrodynamics of a two-component fluid membrane near a repulsive wall, via a model which incorporates curvature- concentration coupling as well as hydrodynamic interactions. This model is a simplified version of a…

Soft Condensed Matter · Physics 2009-11-07 Sumithra Sankararaman , Gautam I. Menon , P. B. Sunil Kumar

Microswimmers exhibit more diverse behavior in quasi-two dimensions than in three dimensions. Such behavior remains elusive due to the analytical difficulty of dealing with two parallel solid boundaries. The existence of additional…

Soft Condensed Matter · Physics 2023-01-18 Yuki Takaha , Daiki Nishiguchi

Cooperation between micro-organisms give rise to novel phenomena like clustering, swarming in suspension. We study the collective behavior of the artificial swimmer called Taylor line at low Reynolds number using multi-particle collision…

Soft Condensed Matter · Physics 2018-02-14 Adyant Agrawal , Sujin B. Babu

We experimentally investigate the effects of polymer additives on the collective dynamics of swarming Serratia marcescens in quasi two-dimensional (2D) liquid films. We find that even minute amounts of polymers (< 20 ppm) can significantly…

Soft Condensed Matter · Physics 2022-08-09 Ranjiangshang Ran , David A. Gagnon , Alexander Morozov , Paulo E. Arratia

The hydrodynamic flow field generated by self-propelled active particles and swimming microorganisms is strongly altered by the presence of nearby boundaries in a viscous flow. Using a simple model three-linked sphere swimmer, we show that…

Fluid Dynamics · Physics 2018-04-18 Abdallah Daddi-Moussa-Ider , Maciej Lisicki , Christian Hoell , Hartmut Löwen

To survive in harsh conditions, motile bacteria swim in complex environment and respond to the surrounding flow. Here we develop a PDE model describing how the flagella bending affects macroscopic properties of bacterial suspensions. First,…

Analysis of PDEs · Mathematics 2016-10-11 Mykhailo Potomkin , Magali Tournus , Leonid Berlyand , Igor Aranson

We study active agents embedded in bulk or in confinement explicitly considering hydrodynamics and simulating the swimmers via an implementation inspired by the squirmer model. We develop a Dissipative Particle Dynamics scheme for the…

While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different. Here we study the dynamics of polymers in a viscous medium containing…

Soft Condensed Matter · Physics 2017-06-23 Jaeoh Shin , Andrey G. Cherstvy , Won Kyu Kim , Vasily Zaburdaev

The macroscopic properties of polymeric fluids are inherited from the material properties of the fibers embedded in the solvent. The behavior of such passive fibers in flow has been of interest in a wide range of systems, including cellular…

Soft Condensed Matter · Physics 2019-06-20 John LaGrone , Ricardo Cortez , Wen Yan , Lisa Fauci

It has been known for some time that some microorganisms can swim faster in high-viscosity gel-forming polymer solutions. These gel-like media come to mimic highly viscous heterogeneous environment that these microorganisms encounter…

Fluid Dynamics · Physics 2009-11-29 A. M. Leshansky
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