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Neural networks that compute over graph structures are a natural fit for problems in a variety of domains, including natural language (parse trees) and cheminformatics (molecular graphs). However, since the computation graph has a different…

Neural and Evolutionary Computing · Computer Science 2017-02-23 Moshe Looks , Marcello Herreshoff , DeLesley Hutchins , Peter Norvig

Motion planning is an important and well-studied field of robotics. A typical approach to finding a route is to construct a {\em cell graph} representing a scene and then to find a path in such a graph. In this paper we present and analyze…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-23 Krzysztof Kaczmarski , Paweł Rzążewski , Albert Wolant

We present a new model of computation, described in terms of monoidal categories. It conforms the Church-Turing Thesis, and captures the same computable functions as the standard models. It provides a succinct categorical interface to most…

Logic in Computer Science · Computer Science 2015-03-20 Dusko Pavlovic

This paper provides an introduction to trace diagrams at a level suitable for advanced undergraduates. Trace diagrams are a non-traditional notation for linear algebra. Vectors are represented by edges in a diagram, and matrices by markings…

History and Overview · Mathematics 2009-10-09 Elisha Peterson

In this article we discuss a data structure, which combines advantages of two different ways for representing graphs: adjacency matrix and collection of adjacency lists. This data structure can fast add and search edges (advantages of…

Data Structures and Algorithms · Computer Science 2009-08-24 Maxim A. Kolosovskiy

In this master thesis we analyze the complexity of sorting a set of strings. It was shown that the complexity of sorting strings can be naturally expressed in terms of the prefix trie induced by the set of strings. The model of computation…

Data Structures and Algorithms · Computer Science 2014-08-26 Igor Stassiy

This paper describes substantial advances in the analysis (parsing) of diagrams using constraint grammars. The addition of set types to the grammar and spatial indexing of the data make it possible to efficiently parse real diagrams of…

cmp-lg · Computer Science 2008-02-03 Robert P. Futrelle , Nikos Nikolakis

Symmetric monoidal categories (SMCs) are a common framework for reasoning about computation, focusing on the parallel and sequential compositionality of operations. String diagrams are a ubiquitous and powerful tool for reasoning about…

Logic in Computer Science · Computer Science 2026-05-26 Benjamin Caldwell , William Spencer , Aleks Kissinger , Robert Rand

Linear diagrams are an effective way to visualize set-based data by representing elements as columns and sets as rows with one or more horizontal line segments, whose vertical overlaps with other rows indicate set intersections and their…

Computational Geometry · Computer Science 2022-08-18 Alexander Dobler , Martin Nöllenburg

Whereas string diagrams for strict monoidal categories are well understood, and have found application in several fields of Computer Science, graphical formalisms for non-strict monoidal categories are far less studied. In this paper, we…

Category Theory · Mathematics 2024-11-06 Paul Wilson , Dan Ghica , Fabio Zanasi

A string graph is an intersection graph of curves in the plane. A $k$-string graph is a graph with a string representation in which every pair of curves intersects in at most $k$ points. We introduce the class of $(=k)$-string graphs as a…

Combinatorics · Mathematics 2023-08-31 Petr Chmel , Vít Jelínek

Hardware architectures and machine learning (ML) libraries evolve rapidly. Traditional compilers often fail to generate high-performance code across the spectrum of new hardware offerings. To mitigate, engineers develop hand-tuned kernels…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-18 Tim Zerrell , Jeremy Bruestle

Rectangular layouts, subdivisions of an outer rectangle into smaller rectangles, have many applications in visualizing spatial information, for instance in rectangular cartograms in which the rectangles represent geographic or political…

Computational Geometry · Computer Science 2016-08-12 Kevin Buchin , David Eppstein , Maarten Löffler , Martin Nöllenburg , Rodrigo I. Silveira

String diagrams are a powerful and intuitive graphical syntax for terms of symmetric monoidal categories (SMCs). They find many applications in computer science and are becoming increasingly relevant in other fields such as physics and…

Category Theory · Mathematics 2016-12-01 Filippo Bonchi , Fabio Gadducci , Aleks Kissinger , Pawel Sobocinski , Fabio Zanasi

Motivated by deep learning regimes with multiple interacting yet distinct model components, we introduce learning diagrams, graphical depictions of training setups that capture parameterized learning as data rather than code. A learning…

Machine Learning · Computer Science 2025-01-06 Mason Lary , Richard Samuelson , Alexander Wilentz , Alina Zare , Matthew Klawonn , James P. Fairbanks

The aim of this thesis is to present an extension to the string graphs of Dixon, Duncan and Kissinger that allows the finite representation of certain infinite families of graphs and graph rewrite rules, and to demonstrate that a logic can…

Logic in Computer Science · Computer Science 2014-04-01 Alexander Merry

A graph is a data structure composed of dots (i.e. vertices) and lines (i.e. edges). The dots and lines of a graph can be organized into intricate arrangements. The ability for a graph to denote objects and their relationships to one…

Data Structures and Algorithms · Computer Science 2010-09-07 Marko A. Rodriguez , Peter Neubauer

The theory of sequences, supported by many SMT solvers, can model program data types including bounded arrays and lists. Sequences are parameterized by the element data type and provide operations such as accessing elements, concatenation,…

Programming Languages · Computer Science 2025-09-09 Denghang Hu , Taolue Chen , Philipp Rümmer , Fu Song , Zhilin Wu

Graphs, and sequences of growing graphs, can be used to specify the architecture of mathematical models in many fields including machine learning and computational science. Here we define structured graph "lineages" (ordered by level…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Eric Mjolsness , Cory B. Scott

The new approach to representation of syntax of formal languages-- a formalism of syntax diagrams is offered. Syntax diagrams look a convenient language for the description of syntactic relations in the languages having nonlinear…

Logic in Computer Science · Computer Science 2008-02-28 Vladimir Lapshin