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In the clinical routine, short axis (SA) cine cardiac MR (CMR) image stacks are acquired during multiple subsequent breath-holds. If the patient cannot consistently hold the breath at the same position, the acquired image stack will be…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Giacomo Tarroni , Ozan Oktay , Matthew Sinclair , Wenjia Bai , Andreas Schuh , Hideaki Suzuki , Antonio de Marvao , Declan O'Regan , Stuart Cook , Daniel Rueckert

In cardiac magnetic resonance (CMR) imaging, a 3D high-resolution segmentation of the heart is essential for detailed description of its anatomical structures. However, due to the limit of acquisition duration and respiratory/cardiac…

Image and Video Processing · Electrical Eng. & Systems 2021-07-09 Shuo Wang , Chen Qin , Nicolo Savioli , Chen Chen , Declan O'Regan , Stuart Cook , Yike Guo , Daniel Rueckert , Wenjia Bai

Cardiac magnetic resonance (CMR) imaging and computed tomography (CT) are two common non-invasive imaging methods for assessing patients with cardiovascular disease. CMR typically acquires multiple sparse 2D slices, with unavoidable…

Image and Video Processing · Electrical Eng. & Systems 2024-08-15 Yiyang Xu , Hao Xu , Matthew Sinclair , Esther Puyol-Antón , Steven A Niederer , Amedeo Chiribiri , Steven E Williams , Michelle C Williams , Alistair A Young

Background: Conventional cardiovascular magnetic resonance (CMR) in paediatric and congenital heart disease uses 2D, breath-hold, balanced steady state free precession (bSSFP) cine imaging for assessment of function and cardiac-gated,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Mark Wrobel , Michele Pascale , Tina Yao , Ruaraidh Campbell , Elena Milano , Michael Quail , Jennifer Steeden , Vivek Muthurangu

Accelerating the acquisition of magnetic resonance imaging (MRI) is a challenging problem, and many works have been proposed to reconstruct images from undersampled k-space data. However, if the main purpose is to extract certain…

Image and Video Processing · Electrical Eng. & Systems 2019-08-22 Chen Qin , Wenjia Bai , Jo Schlemper , Steffen E. Petersen , Stefan K. Piechnik , Stefan Neubauer , Daniel Rueckert

In real-time (RT) cardiac cine imaging, a stack of 2D slices is collected sequentially under free-breathing conditions. A complete heartbeat from each slice is then used for cardiac function quantification. The inter-slice respiratory…

Image and Video Processing · Electrical Eng. & Systems 2020-07-10 Chong Chen , Yingmin Liu , Orlando P. Simonetti , Rizwan Ahmad

Free-breathing cardiac MRI schemes are emerging as competitive alternatives to breath-held cine MRI protocols, enabling applicability to pediatric and other population groups that cannot hold their breath. Because the data from the slices…

Image and Video Processing · Electrical Eng. & Systems 2021-11-23 Qing Zou , Abdul Haseeb Ahmed , Prashant Nagpal , Sarv Priya , Rolf F Schulte , Mathews Jacob

Accurate segmentation of myocardial lesions from multi-sequence cardiac magnetic resonance imaging is essential for cardiac disease diagnosis and treatment planning. However, achieving optimal feature correspondence is challenging due to…

Image and Video Processing · Electrical Eng. & Systems 2025-07-17 Yifan Gao , Shaohao Rui , Haoyang Su , Jinyi Xiang , Lianming Wu , Xiaosong Wang

We propose a method based on deep learning to perform cardiac segmentation on short axis MRI image stacks iteratively from the top slice (around the base) to the bottom slice (around the apex). At each iteration, a novel variant of U-net is…

Computer Vision and Pattern Recognition · Computer Science 2018-04-26 Qiao Zheng , Hervé Delingette , Nicolas Duchateau , Nicholas Ayache

Accurate motion estimation at high acceleration factors enables rapid motion-compensated reconstruction in Magnetic Resonance Imaging (MRI) without compromising the diagnostic image quality. In this work, we introduce an attention-aware…

Image and Video Processing · Electrical Eng. & Systems 2024-04-30 Aya Ghoul , Jiazhen Pan , Andreas Lingg , Jens Kübler , Patrick Krumm , Kerstin Hammernik , Daniel Rueckert , Sergios Gatidis , Thomas Küstner

Cardiac magnetic resonance imaging is a valuable non-invasive tool for identifying cardiovascular diseases. For instance, Cine MRI is the benchmark modality for assessing the cardiac function and anatomy. On the other hand, multi-contrast…

Image and Video Processing · Electrical Eng. & Systems 2023-10-11 George Yiasemis , Nikita Moriakov , Jan-Jakob Sonke , Jonas Teuwen

3D motion estimation from cine cardiac magnetic resonance (CMR) images is important for the assessment of cardiac function and diagnosis of cardiovascular diseases. Most of the previous methods focus on estimating pixel-/voxel-wise motion…

Image and Video Processing · Electrical Eng. & Systems 2022-09-07 Qingjie Meng , Wenjia Bai , Tianrui Liu , Declan P O'Regan , Daniel Rueckert

Continuous protocols for cardiac magnetic resonance imaging enable sampling of the cardiac anatomy simultaneously resolved into cardiac phases. To avoid respiration artifacts, associated motion during the scan has to be compensated for…

Computer Vision and Pattern Recognition · Computer Science 2020-12-29 Elisabeth Hoppe , Jens Wetzl , Philipp Roser , Lina Felsner , Alexander Preuhs , Andreas Maier

Cardiac cine magnetic resonance imaging (MRI) is one of the important means to assess cardiac functions and vascular abnormalities. Mitigating artifacts arising during image reconstruction and accelerating cardiac cine MRI acquisition to…

Image and Video Processing · Electrical Eng. & Systems 2024-07-03 Xiaoxiang Han , Yang Chen , Qiaohong Liu , Yiman Liu , Keyan Chen , Yuanjie Lin , Weikun Zhang

Joint 2D cardiac segmentation and 3D volume reconstruction are fundamental to building statistical cardiac anatomy models and understanding functional mechanisms from motion patterns. However, due to the low through-plane resolution of cine…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Qi Chang , Zhennan Yan , Mu Zhou , Di Liu , Khalid Sawalha , Meng Ye , Qilong Zhangli , Mikael Kanski , Subhi Al Aref , Leon Axel , Dimitris Metaxas

We propose an unsupervised deep learning algorithm for the motion-compensated reconstruction of 5D cardiac MRI data from 3D radial acquisitions. Ungated free-breathing 5D MRI simplifies the scan planning, improves patient comfort, and…

Image and Video Processing · Electrical Eng. & Systems 2023-09-12 Joseph Kettelkamp , Ludovica Romanin , Davide Piccini , Sarv Priya , Mathews Jacob

The perfect alignment of 3D echocardiographic images captured from various angles has improved image quality and broadened the field of view. This study proposes an accelerated sequential Monte Carlo (SMC) algorithm for 3D-3D rigid…

Image and Video Processing · Electrical Eng. & Systems 2025-04-29 Thanuja Uruththirakodeeswaran , Harald Becher , Michelle Noga , Lawrence H. Le , Pierre Boulanger , Jonathan Windram , Kumaradevan Punithakumar

Accurate segmentation of heart structures imaged by cardiac MR is key for the quantitative analysis of pathology. High-resolution 3D MR sequences enable whole-heart structural imaging but are time-consuming, expensive to acquire and they…

Computer Vision and Pattern Recognition · Computer Science 2019-03-01 Carlo Biffi , Juan J. Cerrolaza , Giacomo Tarroni , Antonio de Marvao , Stuart A. Cook , Declan P. O'Regan , Daniel Rueckert

A joint image reconstruction and segmentation approach based on disentangled representation learning was trained to enable cardiac cine MR imaging in real-time and under free-breathing. An exploratory feasibility study tested the proposed…

Motion-compensated MR reconstruction (MCMR) is a powerful concept with considerable potential, consisting of two coupled sub-problems: Motion estimation, assuming a known image, and image reconstruction, assuming known motion. In this work,…

Image and Video Processing · Electrical Eng. & Systems 2022-09-09 Jiazhen Pan , Daniel Rueckert , Thomas Küstner , Kerstin Hammernik
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