Related papers: On reduced unicellular hypermonopoles
We study the slices or sections of a convex polytope by affine hyperplanes. We present results on two key problems: First, we provide tight bounds on the maximum number of vertices attainable by a hyperplane slice of $d$-polytope (a sort of…
A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…
Universal cycles, such as De Bruijn cycles, are cyclic sequences of symbols that represent every combinatorial object from some family exactly once as a consecutive subsequence. Graph universal cycles are a graph analogue of universal…
Simple cycles, also known as self-avoiding polygons, are cycles on graphs which are not allowed to visit any vertex more than once. We present an exact formula for enumerating the simple cycles of any length on any directed graph involving…
Hypergraphs are structures that can be decomposed or described; in other words they are recursively countable. Here, we get exact and asymptotic enumeration results on hypergraphs by means of exponential generating functions. The number of…
In this work, we describe a method for large-scale 3D cell-tracking through a segmentation selection approach. The proposed method is effective at tracking cells across large microscopy datasets on two fronts: (i) It can solve problems…
The aim of this chapter is to provide an adequate graph theoretic framework for the description of periodic bifurcations which have recently been discovered in descendant trees of finite p-groups. The graph theoretic concepts of rooted…
This paper provides the generating series for the embedding of tree-like graphs of arbitrary number of vertices, accourding to their genus. It applies and extends the techniques of Chan, where it was used to give an alternate proof of the…
A method to construct and count all the linear codes (of arbitrary length) in $\mathbb{F}_{4}$ that are invariant under reverse permutation and that contain the repetition code is presented. These codes are suitable for constructing DNA…
Suppose we are given an infinite sequence of input cells, each initialized with a uniform random symbol from $[n]$. How hard is it to output a sequence in $[n]^n$ that is close to a uniform random permutation? Viola (SICOMP 2020)…
The parallel product of two rooted maps was introduced by S. E. Wilson in 1994. The main question of this paper is whether for a given reflexible map $M$ one can decompose the map into a parallel product of two reflexible maps. This can be…
A formula of Stembridge states that the permutation peak polynomials and descent polynomials are connected via a quadratique transformation. The aim of this paper is to establish the cycle analogue of Stembridge's formula by using cycle…
This paper investigates the problem of listing faces of combinatorial polytopes, such as hypercubes, permutahedra, associahedra, and their generalizations. Firstly, we consider the face lattice, which is the inclusion order of all faces of…
Crossover is the process of recombining the genetic features of two parents. For many applications where crossover is applied to permutations, relevant genetic features are pairs of adjacent elements, also called edges in the permutation…
Directed acyclic graphs are the basic representation of the structure underlying Bayesian networks, which represent multivariate probability distributions. In many practical applications, such as the reverse engineering of gene regulatory…
Let $X$ be a set of $4$ generic points in $\mathbb{P}^2$ with homogeneous coordinate ring $R$. We classify indecomposable graded MCM modules over $R$ by reducing the classification to the Four Subspace problem solved by Nazarova and…
Cell counting is a ubiquitous, yet tedious task that would greatly benefit from automation. From basic biological questions to clinical trials, cell counts provide key quantitative feedback that drive research. Unfortunately, cell counting…
Ultrafilters are very useful and versatile objects with applications throughout mathematics: in topology, analysis, combinarotics, model theory, and even theory of social choice. Proofs based on ultrafilters tend to be shorter and more…
For various quadruple systems F, we give asymptotically sharp lower bounds on the number of copies of F in a quadruple system with a prescribed number of vertices and edges. Our results extend those of Furedi, Keevash, Pikhurko, Simonovits…
Given a surface with boundary and some points on its boundary, a polygon diagram is a way to connect those points as vertices of non-overlapping polygons on the surface. Such polygon diagrams represent non-crossing permutations on a surface…