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We suggest a 3D phase field model to describe 3D cell spreading on a flat substrate. The model is a simplified version of a minimal model that was developed in [1]. Our model couples the order parameter $u$ with 3D polarization…

Biological Physics · Physics 2021-06-25 Mohammad Abu Hamed , Alexander A. Nepomnyashchy

This work studies time-dependent electromagnetic scattering from obstacles whose interaction with the wave is fully determined by a nonlinear boundary condition. In particular, the boundary condition studied in this work enforces a power…

Numerical Analysis · Mathematics 2023-10-30 Jörg Nick

The goal of the present work is to solve a linear dispersive equation with variable coefficient advection on an unbounded domain. In this setting, transparent boundary conditions are vital to allow waves to leave (or even re-enter) the,…

Numerical Analysis · Mathematics 2021-06-09 Lukas Einkemmer , Alexander Ostermann , Mirko Residori

Equilibrating proteins and other biomacromolecules is cardinal for molecular dynamics simulation of such biological systems in which they perform free dynamics without any externally-applied mechanical constraint, until thermodynamic…

Soft Condensed Matter · Physics 2021-02-11 Ashkan Shekaari , Mahmoud Jafari

Transient electric fields across cell bilayer membranes can lead to electroporation, as well as to cell fusion, and have been extensively studied. We find that transmembrane electric fields similar to those in cells can lead to a massive,…

Materials Science · Physics 2023-06-27 Yu Zhang , Di Jin , Ran Tivony , Nir Kampf , Jacob Klein

Consider an ambient medium and a heterogeneous entity composed of a bidimensional material surrounded by a thin membrane. The electromagnetic constants of these materials are different. By analogy with biological cells, we call this entity…

Analysis of PDEs · Mathematics 2007-05-23 Clair Poignard

Simple models for spherical particles with a soft shell have been shown to self-assemble into numerous crystal phases and even quasicrystals. However, most of these models rely on a simple pairwise interaction, which is usually a valid…

Soft Condensed Matter · Physics 2020-09-03 Emanuele Boattini , Nina Bezem , Sudeep N. Punnathanam , Frank Smallenburg , Laura Filion

We derive a mathematical model for the motion of several insulating rigid bodies through an electrically conducting fluid. Starting from a universal model describing this phenomenon in generality, we elaborate (simplifying) physical…

Mathematical Physics · Physics 2024-02-13 Jan Scherz , Anja Schlömerkemper

The scattering of electromagnetic waves from obstacles with wave-material interaction in thin layers on the surface is described by generalized impedance boundary conditions, which provide effective approximate models. In particular, this…

Numerical Analysis · Mathematics 2022-02-04 Jörg Nick , Balázs Kovács , Christian Lubich

In Part I of this article we have developed a novel mechanobiological model of a Tissue Engineering process that accounts for the mechanisms through which an isotropic or anisotropic adherence condition regulates the active functions of the…

Numerical Analysis · Mathematics 2015-12-14 Chiara Lelli , Riccardo Sacco , Paola Causin , Manuela T. Raimondi

Electroporation is a physical method to induce the uptake of therapeutic drugs and DNA, by eukaryotic cells and tissues. The phenomena behind electro-mediated membrane permeabilization to plasmid DNA have been shown to be significantly more…

We develop multilevel methods for interface-driven multiphysics problems that can be coupled across dimensions and where complexity and strength of the interface coupling deteriorates the performance of standard methods. We focus on solvers…

Numerical Analysis · Mathematics 2023-05-11 Ana Budisa , Xiaozhe Hu , Miroslav Kuchta , Kent-Andre Mardal , Ludmil Tomov Zikatanov

Voltage and charge distributions in cellular microdomains regulate communications, excitability, and signal transduction. We report here new electrical laws in a cell, which follow from a nonlinear electro-diffusion model. These newly…

Biological Physics · Physics 2017-01-03 Jerome Cartailler , Zeev Schuss , David Holcman

We introduce a model for ionic electrodiffusion and osmotic water flow through cells and tissues. The model consists of a system of partial differential equations for ionic concentration and fluid flow with interface conditions at deforming…

Cell Behavior · Quantitative Biology 2017-08-23 Yoichiro Mori , Chun Liu , Robert S. Eisenberg

The dielectric layers surrounding a metasurface have a large impact on its frequency and angular response. The notion of effective permittivity captures this dependence by suggesting that a layered dielectric environment will perturb…

Applied Physics · Physics 2024-10-24 Christopher T. Howard , William D. Hunt , Kenneth W. Allen

We consider the scattering of time periodic electro-magnetic fields by metallic obstacles, the eddy current problem. In this interface problem different sets of Maxwell equations must be solved in the obstacle and outside, while the…

Numerical Analysis · Mathematics 2016-05-26 M. Maischak , Z. Nezhi , J. E. Ospino , E. P. Stephan

We consider a continuum mechanical model for the migration of multiple cell populations through parts of tissue separated by thin membranes. In this model, cells belonging to different populations may be characterised by different…

Analysis of PDEs · Mathematics 2021-09-28 Chiara Giverso , Tommaso Lorenzi , Luigi Preziosi

The recent discovery of electro-active polymers has shown great promises in the field of soft robotics, and was logically followed by experimental, numerical and theoretical developments. Most of these studies were concerned with systems…

Soft Condensed Matter · Physics 2020-12-07 Hadrien Bense , Benoît Roman , Bruno Andreotti

The dynamics of a membrane is a coupled system comprising a moving elastic surface and an incompressible membrane fluid. We will consider a reduced elastic surface model, which involves the evolution equations of the moving surface, the…

Analysis of PDEs · Mathematics 2015-05-27 Wei Wang , Pingwen Zhang , Zhifei Zhang

It is well known that lipid membranes respond to a threshold transmembrane electric field through a reversible mechanism called electroporation, where hydrophilic water pores form across the membrane, an effect widely used in biological…

Soft Condensed Matter · Physics 2023-04-17 Di Jin , Yu Zhang , Jacob Klein
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