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Computer graphics, 3D computer vision and robotics communities have produced multiple approaches to representing 3D geometry for rendering and reconstruction. These provide trade-offs across fidelity, efficiency and compression…

Computer Vision and Pattern Recognition · Computer Science 2019-01-17 Jeong Joon Park , Peter Florence , Julian Straub , Richard Newcombe , Steven Lovegrove

Deep convolutional neural networks (CNNs) have demonstrated impressive performance on many visual tasks. Recently, they became useful models for the visual system in neuroscience. However, it is still not clear what are learned by CNNs in…

Neurons and Cognition · Quantitative Biology 2020-02-19 Qi Yan , Yajing Zheng , Shanshan Jia , Yichen Zhang , Zhaofei Yu , Feng Chen , Yonghong Tian , Tiejun Huang , Jian K. Liu

Identifying cancer driver genes (CDGs) is essential for understanding cancer mechanisms and developing targeted therapies. Graph neural networks (GNNs) have recently been employed to identify CDGs by capturing patterns in biological…

Genomics · Quantitative Biology 2025-10-09 Bang Chen , Lijun Guo , Houli Fan , Wentao He , Rong Zhang

Recently, sophisticated deep learning-based approaches have been developed for generating efficient initial guesses to accelerate the convergence of density functional theory (DFT) calculations. While the actual initial guesses are often…

Chemical Physics · Physics 2026-03-24 Zhe Liu , Yuyan Ni , Zhichen Pu , Qiming Sun , Siyuan Liu , Wen Yan

We propose a simple, yet effective approach for spatiotemporal feature learning using deep 3-dimensional convolutional networks (3D ConvNets) trained on a large scale supervised video dataset. Our findings are three-fold: 1) 3D ConvNets are…

Computer Vision and Pattern Recognition · Computer Science 2015-10-08 Du Tran , Lubomir Bourdev , Rob Fergus , Lorenzo Torresani , Manohar Paluri

Histology images are inherently symmetric under rotation, where each orientation is equally as likely to appear. However, this rotational symmetry is not widely utilised as prior knowledge in modern Convolutional Neural Networks (CNNs),…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Simon Graham , David Epstein , Nasir Rajpoot

Deep Convolutional Neural Networks (CNN) have evolved as popular machine learning models for image classification during the past few years, due to their ability to learn the problem-specific features directly from the input images. The…

Computer Vision and Pattern Recognition · Computer Science 2021-01-29 S. H. Shabbeer Basha , Sravan Kumar Vinakota , Shiv Ram Dubey , Viswanath Pulabaigari , Snehasis Mukherjee

Learning in Deep Neural Networks (DNN) takes place by minimizing a non-convex high-dimensional loss function, typically by a stochastic gradient descent (SGD) strategy. The learning process is observed to be able to find good minimizers…

Machine Learning · Computer Science 2020-03-12 Carlo Baldassi , Fabrizio Pittorino , Riccardo Zecchina

Graph neural networks (GNNs) have significantly improved the representation power for graph-structured data. Despite of the recent success of GNNs, the graph convolution in most GNNs have two limitations. Since the graph convolution is…

Machine Learning · Computer Science 2021-12-30 Jinyoung Park , Sungdong Yoo , Jihwan Park , Hyunwoo J. Kim

Deep convolutional neural networks have become a key element in the recent breakthrough of salient object detection. However, existing CNN-based methods are based on either patch-wise (region-wise) training and inference or fully…

Computer Vision and Pattern Recognition · Computer Science 2018-04-03 Guanbin Li , Yizhou Yu

Three decades ago, Atick et al. suggested that human frequency sensitivity may emerge from the enhancement required for a more efficient analysis of retinal images. Here we reassess the relevance of low-level vision tasks in the explanation…

Neurons and Cognition · Quantitative Biology 2022-05-24 Qiang Li , Alex Gomez-Villa , Marcelo Bertalmio , Jesus Malo

We propose an accurate and lightweight convolutional neural network for stereo estimation with depth completion. We name this method fully-convolutional deformable similarity network with depth completion (FCDSN-DC). This method extends…

Computer Vision and Pattern Recognition · Computer Science 2022-09-15 Dominik Hirner , Friedrich Fraundorfer

Models based on Convolutional Neural Networks (CNNs) have been proven very successful for semantic segmentation and object parsing that yield hierarchies of features. Our key insight is to build convolutional networks that take input of…

Artificial Intelligence · Computer Science 2017-10-31 Jalal Mirakhorli , Hamidreza Amindavar

Sensor drift is a major problem in chemical sensors that requires addressing for reliable and accurate detection of chemical analytes. In this paper, we develop a causal convolutional neural network (CNN) with a Discrete Cosine Transform…

Signal Processing · Electrical Eng. & Systems 2020-11-16 Diaa Badawi , Agamyrat Agambayev , Sule Ozev , A. Enis Cetin

Deep learning is a fast-growing machine learning approach to perceive and understand large amounts of data. In this paper, general information about the deep learning approach which is attracted much attention in the field of machine…

Image and Video Processing · Electrical Eng. & Systems 2018-08-28 Çağrı Kaymak , Ayşegül Uçar

Computational molecular representations underpin virtual screening, property prediction, and materials discovery. Conventional fingerprints are efficient and deterministic but lose structural information through hash-based compression,…

Machine Learning · Computer Science 2026-05-01 Jonas Teufel , Luca Torresi , André Eberhard , Pascal Friederich

Surface defect detection is an extremely crucial step to ensure the quality of industrial products. Nowadays, convolutional neural networks (CNNs) based on encoder-decoder architecture have achieved tremendous success in various defect…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Junpu Wang , Guili Xu , Fuju Yan , Jinjin Wang , Zhengsheng Wang

Depth prediction is one of the fundamental problems in computer vision. In this paper, we propose a simple yet effective convolutional spatial propagation network (CSPN) to learn the affinity matrix for various depth estimation tasks.…

Computer Vision and Pattern Recognition · Computer Science 2019-10-07 Xinjing Cheng , Peng Wang , Ruigang Yang

Deep neural network (DNN) models have recently obtained state-of-the-art prediction accuracy for the transcription factor binding (TFBS) site classification task. However, it remains unclear how these approaches identify meaningful DNA…

Machine Learning · Computer Science 2016-10-20 Jack Lanchantin , Ritambhara Singh , Beilun Wang , Yanjun Qi

Deep-learning density functional theory (DFT) shows great promise to significantly accelerate material discovery and potentially revolutionize materials research. However, current research in this field primarily relies on data-driven…

Computational Physics · Physics 2024-08-14 Yang Li , Zechen Tang , Zezhou Chen , Minghui Sun , Boheng Zhao , He Li , Honggeng Tao , Zilong Yuan , Wenhui Duan , Yong Xu