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Diffusion MRI (dMRI) tractography enables in vivo mapping of brain structural connections, but traditional connectome generation is time-consuming and requires gray matter parcellation, posing challenges for large-scale studies. We…

Image and Video Processing · Electrical Eng. & Systems 2025-06-12 Marcus J. Vroemen , Yuqian Chen , Yui Lo , Tengfei Xue , Weidong Cai , Fan Zhang , Josien P. W. Pluim , Lauren J. O'Donnell

In this paper, we investigate an open research task of cross-modal retrieval between 3D shapes and textual descriptions. Previous approaches mainly rely on point cloud encoders for feature extraction, which may ignore key inherent features…

Computer Vision and Pattern Recognition · Computer Science 2024-05-08 Hao Wu , Ruochong LI , Hao Wang , Hui Xiong

Diffusion MRI tractography is an advanced imaging technique that enables in vivo mapping of the brain's white matter connections. White matter parcellation classifies tractography streamlines into clusters or anatomically meaningful tracts.…

Image and Video Processing · Electrical Eng. & Systems 2023-01-25 Tengfei Xue , Fan Zhang , Chaoyi Zhang , Yuqian Chen , Yang Song , Alexandra J. Golby , Nikos Makris , Yogesh Rathi , Weidong Cai , Lauren J. O'Donnell

This paper presents a learning-based approach for accurately estimating the 3D shape of flexible continuum robots subjected to external loads. The proposed method introduces a spatiotemporal neural network architecture that fuses…

Robotics · Computer Science 2025-10-28 Enyi Wang , Zhen Deng , Chuanchuan Pan , Bingwei He , Jianwei Zhang

Human perception plays a vital role in forming beliefs and understanding reality. A deeper understanding of brain functionality will lead to the development of novel deep neural networks. In this work, we introduce a novel framework named…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Xuan-Bac Nguyen , Xin Li , Pawan Sinha , Samee U. Khan , Khoa Luu

Neuroscientists evaluate deep neural networks for natural language processing as possible candidate models for how language is processed in the brain. These models are often trained without explicit linguistic supervision, but have been…

Computation and Language · Computer Science 2021-02-01 Mostafa Abdou , Ana Valeria Gonzalez , Mariya Toneva , Daniel Hershcovich , Anders Søgaard

\hspace{2mm} Diffusion-weighted magnetic resonance imaging (dMRI) of the brain offers unique capabilities including noninvasive probing of tissue microstructure and structural connectivity. It is widely used for clinical assessment of…

Image and Video Processing · Electrical Eng. & Systems 2025-12-30 Davood Karimi , Simon K. Warfield

To address the limitations of Transformer decoders in capturing edge details, recognizing local textures and modeling spatial continuity, this paper proposes a novel decoder framework specifically designed for medical image segmentation,…

Computer Vision and Pattern Recognition · Computer Science 2025-12-08 Fan Zhang , Zhiwei Gu , Hua Wang

Visual reconstruction algorithms are an interpretive tool that map brain activity to pixels. Past reconstruction algorithms employed brute-force search through a massive library to select candidate images that, when passed through an…

Neurons and Cognition · Quantitative Biology 2023-05-03 Reese Kneeland , Jordyn Ojeda , Ghislain St-Yves , Thomas Naselaris

Transformer-based deep neural networks have achieved remarkable success across various computer vision tasks, largely attributed to their long-range self-attention mechanism and scalability. However, most transformer architectures embed…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 Muyi Bao , Changyu Zeng , Yifan Wang , Zhengni Yang , Zimu Wang , Guangliang Cheng , Jun Qi , Wei Wang

Purpose: Diffusion weighted MRI (dMRI) and its models of neural structure provide insight into human brain organization and variations in white matter. A recent study by McMaster, et al. showed that complex graph measures of the connectome,…

Every day, the human brain processes an immense volume of visual information, relying on intricate neural mechanisms to perceive and interpret these stimuli. Recent breakthroughs in functional magnetic resonance imaging (fMRI) have enabled…

Computer Vision and Pattern Recognition · Computer Science 2023-05-22 Matteo Ferrante , Furkan Ozcelik , Tommaso Boccato , Rufin VanRullen , Nicola Toschi

Deep learning-based segmentation techniques have shown remarkable performance in brain segmentation, yet their success hinges on the availability of extensive labeled training data. Acquiring such vast datasets, however, poses a significant…

Computer Vision and Pattern Recognition · Computer Science 2024-07-18 Jihoon Cho , Suhyun Ahn , Beomju Kim , Hyungjoon Bae , Xiaofeng Liu , Fangxu Xing , Kyungeun Lee , Georges Elfakhri , Van Wedeen , Jonghye Woo , Jinah Park

Understanding how brain structure and function interact is key to explaining intelligence yet modeling them jointly is challenging as the structural and functional connectome capture complementary aspects of organization. We introduced…

Computer Vision and Pattern Recognition · Computer Science 2026-04-01 Badhan Mazumder , Sir-Lord Wiafe , Aline Kotoski , Vince D. Calhoun , Dong Hye Ye

We present a new local descriptor for 3D shapes, directly applicable to a wide range of shape analysis problems such as point correspondences, semantic segmentation, affordance prediction, and shape-to-scan matching. The descriptor is…

Computer Vision and Pattern Recognition · Computer Science 2017-09-06 Haibin Huang , Evangelos Kalogerakis , Siddhartha Chaudhuri , Duygu Ceylan , Vladimir G. Kim , Ersin Yumer

Reconstructing images seen by people from their fMRI brain recordings provides a non-invasive window into the human brain. Despite recent progress enabled by diffusion models, current methods often lack faithfulness to the actual seen…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Roman Beliy , Amit Zalcher , Jonathan Kogman , Navve Wasserman , Michal Irani

Predicting cognition from neuroimaging data in healthy individuals offers insights into the neural mechanisms underlying cognitive abilities, with potential applications in precision medicine and early detection of neurological and…

Machine Learning · Computer Science 2025-07-29 Jagruti Patel , Mikkel Schöttner , Thomas A. W. Bolton , Patric Hagmann

Resting-state functional magnetic resonance imaging (rs-fMRI) offers valuable insights into the human brain's functional organization and is a powerful tool for investigating the relationship between brain function and cognitive processes,…

Machine Learning · Computer Science 2025-02-10 Bishal Thapaliya , Esra Akbas , Ram Sapkota , Bhaskar Ray , Vince Calhoun , Jingyu Liu

Cognitive Behavioral Therapy (CBT) is a goal-oriented psychotherapy for mental health concerns implemented in a conversational setting with broad empirical support for its effectiveness across a range of presenting problems and client…

Audio and Speech Processing · Electrical Eng. & Systems 2020-10-16 Zhuohao Chen , Nikolaos Flemotomos , Victor Ardulov , Torrey A. Creed , Zac E. Imel , David C. Atkins , Shrikanth Narayanan

Neurons in the brain are spatially organized such that neighbors on tissue often exhibit similar response profiles. In the human language system, experimental studies have observed clusters for syntactic and semantic categories, but the…

Computation and Language · Computer Science 2025-05-16 Neil Rathi , Johannes Mehrer , Badr AlKhamissi , Taha Binhuraib , Nicholas M. Blauch , Martin Schrimpf
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