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Related papers: SAM-dPCR: Real-Time and High-throughput Absolute Q…

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Real-time PCR, or Real-time Quantitative PCR (qPCR) is an effective approach to quantify nucleic acid samples. Given the complicated reaction system along with thermal cycles, there has been long-term confusion on accurately calculating the…

Quantitative Methods · Quantitative Biology 2021-03-02 Chuanbo Liu , Jin Wang

Absolute quantification of biological samples entails determining expression levels in precise numerical copies, offering enhanced accuracy and superior performance for rare templates. However, existing methodologies suffer from significant…

Quantitative Methods · Quantitative Biology 2023-09-06 Yuanyuan Wei , Sai Mu Dalike Abaxi , Nawaz Mehmood , Luoquan Li , Fuyang Qu , Guangyao Cheng , Dehua Hu , Yi-Ping Ho , Scott Wu Yuan , Ho-Pui Ho

Accurate molecular quantification is essential for advancing research and diagnostics in fields such as infectious diseases, cancer biology, and genetic disorders. Droplet digital PCR (ddPCR) has emerged as a gold standard for achieving…

Quantitative Methods · Quantitative Biology 2025-01-17 Yuanyuan Wei , Yucheng Wu , Fuyang Qu , Yao Mu , Yi-Ping Ho , Ho-Pui Ho , Wu Yuan , Mingkun Xu

The disparity in healthcare personnel expertise and medical resources across different regions of the world is a pressing social issue. Artificial intelligence technology offers new opportunities to alleviate this issue. Segment Anything…

Computer Vision and Pattern Recognition · Computer Science 2024-10-04 Zhikai Li , Jing Zhang , Qingyi Gu

In digital pathology, precise nuclei segmentation is pivotal yet challenged by the diversity of tissue types, staining protocols, and imaging conditions. Recently, the segment anything model (SAM) revealed overwhelming performance in…

Image and Video Processing · Electrical Eng. & Systems 2024-02-27 Zhen Chen , Qing Xu , Xinyu Liu , Yixuan Yuan

The Segment Anything Model (SAM) has set a new standard in interactive image segmentation, offering robust performance across various tasks. However, its significant computational requirements limit its deployment in real-time or…

Image and Video Processing · Electrical Eng. & Systems 2025-01-29 Kunal Dasharath Patil , Gowthamaan Palani , Ganapathy Krishnamurthi

Accurate image segmentation is crucial in reservoir modelling and material characterization, enhancing oil and gas extraction efficiency through detailed reservoir models. This precision offers insights into rock properties, advancing…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Zhaoyang Ma , Xupeng He , Shuyu Sun , Bicheng Yan , Hyung Kwak , Jun Gao

We introduce SAM3D, a new approach to semi-automatic zero-shot segmentation of 3D images building on the existing Segment Anything Model. We achieve fast and accurate segmentations in 3D images with a four-step strategy involving: user…

Image and Video Processing · Electrical Eng. & Systems 2024-08-09 Trevor J. Chan , Aarush Sahni , Yijin Fang , Jie Li , Alisha Luthra , Alison Pouch , Chamith S. Rajapakse

Background: The segment-anything model (SAM), introduced in April 2023, shows promise as a benchmark model and a universal solution to segment various natural images. It comes without previously-required re-training or fine-tuning specific…

Image and Video Processing · Electrical Eng. & Systems 2023-05-09 Sheng He , Rina Bao , Jingpeng Li , Jeffrey Stout , Atle Bjornerud , P. Ellen Grant , Yangming Ou

Accurate myocardium segmentation across all phases in one cardiac cycle in cine cardiac magnetic resonance (CMR) scans is crucial for comprehensively cardiac function analysis. Despite advancements in deep learning (DL) for automatic cine…

Image and Video Processing · Electrical Eng. & Systems 2024-07-17 Zhennong Chen , Sekeun Kim , Hui Ren , Quanzheng Li , Xiang Li

High-throughput screening using automated microscopes is a key driver in biopharma drug discovery, enabling the parallel evaluation of thousands of drug candidates for diseases such as cancer. Traditional image analysis and deep learning…

Image and Video Processing · Electrical Eng. & Systems 2025-08-20 Jacob Hanimann , Daniel Siegismund , Mario Wieser , Stephan Steigele

Medical image processing usually requires a model trained with carefully crafted datasets due to unique image characteristics and domain-specific challenges, especially in pathology. Primitive detection and segmentation in digitized tissue…

Computer Vision and Pattern Recognition · Computer Science 2024-10-10 Abu Bakor Hayat Arnob , Xiangxue Wang , Yiping Jiao , Xiao Gan , Wenlong Ming , Jun Xu

Histopathology nuclei segmentation is crucial for quantitative tissue analysis and cancer diagnosis. Although existing segmentation methods have achieved strong performance, they are often computationally heavy and show limited…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Muhammad Hassan Maqsood , Yanming Zhu , Alfred Lam , Getamesay Dagnaw , Xuefei Yin , Alan Wee-Chung Liew

The Segment Anything Model (SAM) exhibits a capability to segment a wide array of objects in natural images, serving as a versatile perceptual tool for various downstream image segmentation tasks. In contrast, medical image segmentation…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Yizhe Zhang , Tao Zhou , Shuo Wang , Ye Wu , Pengfei Gu , Danny Z. Chen

The Segment Anything Model (SAM) is a recently proposed prompt-based segmentation model in a generic zero-shot segmentation approach. With the zero-shot segmentation capacity, SAM achieved impressive flexibility and precision on various…

Computer Vision and Pattern Recognition · Computer Science 2023-08-30 Can Cui , Ruining Deng , Quan Liu , Tianyuan Yao , Shunxing Bao , Lucas W. Remedios , Yucheng Tang , Yuankai Huo

The segment anything model (SAM) was released as a foundation model for image segmentation. The promptable segmentation model was trained by over 1 billion masks on 11M licensed and privacy-respecting images. The model supports zero-shot…

We demonstrate novel instrumentation for spontaneous Raman spectroscopy in biofluids, enabling development of a portable, automated, reliable diagnostics technique requiring minimal operator expertise to quantify disease markers. Label-free…

Biological Physics · Physics 2021-05-27 Emily E. Storey , Duxuan Wu , Amr S. Helmy

Image segmentation remains a pivotal component in medical image analysis, aiding in the extraction of critical information for precise diagnostic practices. With the advent of deep learning, automated image segmentation methods have risen…

Image and Video Processing · Electrical Eng. & Systems 2024-03-07 Nhat-Tan Bui , Dinh-Hieu Hoang , Minh-Triet Tran , Gianfranco Doretto , Donald Adjeroh , Brijesh Patel , Arabinda Choudhary , Ngan Le

Deep learning has achieved spectacular performance in image and speech recognition and synthesis. It outperforms other machine learning algorithms in problems where large amounts of data are available. In the area of measurement technology,…

Quantitative Methods · Quantitative Biology 2019-08-20 Yueqin Li , Ata Mahjoubfar , Claire Lifan Chen , Kayvan Reza Niazi , Li Pei , Bahram Jalali

This paper introduces a new Segment Anything Model with Depth Perception (DSAM) for Camouflaged Object Detection (COD). DSAM exploits the zero-shot capability of SAM to realize precise segmentation in the RGB-D domain. It consists of the…

Computer Vision and Pattern Recognition · Computer Science 2024-07-18 Zhenni Yu , Xiaoqin Zhang , Li Zhao , Yi Bin , Guobao Xiao
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