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While deep learning has achieved great success in many fields, one common criticism about deep learning is its lack of interpretability. In most cases, the hidden units in a deep neural network do not have a clear semantic meaning or…

Genomics · Quantitative Biology 2019-06-04 Tianle Ma , Aidong Zhang

Deep learning has made significant advances in creating efficient representations of time series data by automatically identifying complex patterns. However, these approaches lack interpretability, as the time series is transformed into a…

Machine Learning · Computer Science 2023-10-26 Etienne Le Naour , Ghislain Agoua , Nicolas Baskiotis , Vincent Guigue

Vision graph neural networks have emerged as a popular approach for modeling the global and spatial context for image recognition. However, a significant drawback of these methods is that they do not offer an inherent interpretation of the…

Computer Vision and Pattern Recognition · Computer Science 2026-04-23 Ivica Obadic , Dmitry Kangin , Adrian Höhl , Dario Oliveira , Plamen P Angelov , Xiao Xiang Zhu

Despite their large-scale coverage, cross-domain knowledge graphs invariably suffer from inherent incompleteness and sparsity. Link prediction can alleviate this by inferring a target entity, given a source entity and a query relation.…

Computation and Language · Computer Science 2020-09-28 Rajarshi Bhowmik , Gerard de Melo

This paper presents a question answering system that operates exclusively on a knowledge graph retrieval without relying on retrieval augmented generation (RAG) with large language models (LLMs). Instead, a small paraphraser model is used…

Computation and Language · Computer Science 2025-10-23 Kartikeya Aneja , Manasvi Srivastava , Subhayan Das , Nagender Aneja

Inherent explainability is the gold standard in Explainable Artificial Intelligence (XAI). However, there is not a consistent definition or test to demonstrate inherent explainability. Work to date either characterises explainability…

Machine Learning · Computer Science 2025-12-22 Michael Merry , Pat Riddle , Jim Warren

Deep learning-based AI models have been extensively applied in genomics, achieving remarkable success across diverse applications. As these models gain prominence, there exists an urgent need for interpretability methods to establish…

Genomics · Quantitative Biology 2025-05-16 Chenyu Wang , Chaoying Zuo , Zihan Su , Yuhang Xing , Lu Li , Maojun Wang , Zeyu Zhang

Graph neural networks (GNNs) have demonstrated a significant boost in prediction performance on graph data. At the same time, the predictions made by these models are often hard to interpret. In that regard, many efforts have been made to…

Machine Learning · Computer Science 2023-05-24 Yiqiao Li , Jianlong Zhou , Sunny Verma , Fang Chen

In this work, we propose a deep neural architecture that uses an attention mechanism which utilizes region based image features, the natural language question asked, and semantic knowledge extracted from the regions of an image to produce…

Computation and Language · Computer Science 2021-04-06 Tasmia Tasrin , Md Sultan Al Nahian , Brent Harrison

The increasing demand for transparent and reliable models, particularly in high-stakes decision-making areas such as medical image analysis, has led to the emergence of eXplainable Artificial Intelligence (XAI). Post-hoc XAI techniques,…

Computer Vision and Pattern Recognition · Computer Science 2024-11-18 Junlin Hou , Sicen Liu , Yequan Bie , Hongmei Wang , Andong Tan , Luyang Luo , Hao Chen

The growing realism of AI-generated images produced by recent GAN and diffusion models has intensified concerns over the reliability of visual media. Yet, despite notable progress in deepfake detection, current forensic systems degrade…

Computer Vision and Pattern Recognition · Computer Science 2025-12-01 Anshul Bagaria

In today's data-driven era, computational systems generate vast amounts of data that drive the digital transformation of industries, where Artificial Intelligence (AI) plays a key role. Currently, the demand for eXplainable AI (XAI) has…

Artificial Intelligence · Computer Science 2025-03-07 Georgios Makridis , Vasileios Koukos , Georgios Fatouros , Dimosthenis Kyriazis

Many vision and language tasks require commonsense reasoning beyond data-driven image and natural language processing. Here we adopt Visual Question Answering (VQA) as an example task, where a system is expected to answer a question in…

Computer Vision and Pattern Recognition · Computer Science 2018-03-26 Somak Aditya , Yezhou Yang , Chitta Baral

In visual question answering (VQA), an algorithm must answer text-based questions about images. While multiple datasets for VQA have been created since late 2014, they all have flaws in both their content and the way algorithms are…

Computer Vision and Pattern Recognition · Computer Science 2017-09-15 Kushal Kafle , Christopher Kanan

There has been a growing excitement that implicit graph generative models could be used to design or discover new molecules for medicine or material design. Because these molecules have not been discovered, they naturally lie in unexplored…

Machine Learning · Computer Science 2024-11-21 Mai Elkady , Thu Bui , Bruno Ribeiro , David I. Inouye

Deep neural networks have demonstrated remarkable performance across various domains, yet their decision-making processes remain opaque. Although many explanation methods are dedicated to bringing the obscurity of DNNs to light, they…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Kanglong Fan , Yunqiao Yang , Chen Ma

Understanding the reasoning behind deep learning model predictions is crucial in cheminformatics and drug discovery, where molecular design determines their properties. However, current evaluation frameworks for Explainable AI (XAI) in this…

Machine Learning · Computer Science 2025-05-29 Magdalena Proszewska , Tomasz Danel , Dawid Rymarczyk

Growing interest in conversational agents promote twoway human-computer communications involving asking and answering visual questions have become an active area of research in AI. Thus, generation of visual questionanswer pair(s) becomes…

Computer Vision and Pattern Recognition · Computer Science 2023-09-12 Charani Alampalle , Shamanthak Hegde , Soumya Jahagirdar , Shankar Gangisetty

We develop a framework for incorporating structured graphical models in the \emph{encoders} of variational autoencoders (VAEs) that allows us to induce interpretable representations through approximate variational inference. This allows us…

Modern AI systems frequently rely on opaque black-box models, most notably Deep Neural Networks, whose performance stems from complex architectures with millions of learned parameters. While powerful, their complexity poses a major…

Machine Learning · Computer Science 2026-02-23 David Dembinsky , Adriano Lucieri , Stanislav Frolov , Hiba Najjar , Ko Watanabe , Andreas Dengel