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For decades, complex networks, such as social networks, biological networks, chemical networks, technological networks, have been used to study the evolution and dynamics of different kinds of complex systems. These complex systems can be…

Social and Information Networks · Computer Science 2020-12-16 Akrati Saxena

Many important real-world networks manifest "small-world" properties such as scale-free degree distributions, small diameters, and clustering. The most common model of growth for these networks is "preferential attachment", where nodes…

Quantitative Methods · Quantitative Biology 2009-11-13 Samarth Swarup , Les Gasser

Complex spatial structure, with partially isolated subpopulations, and environment heterogeneity, such as gradients in nutrients, oxygen, and drugs, both shape the evolution of natural populations. We investigate the impact of environment…

Populations and Evolution · Quantitative Biology 2026-04-07 Cecilia Fruet , Arthur Alexandre , Alia Abbara , Claude Loverdo , Anne-Florence Bitbol

We consider a class of simple, non-trivial models of evolving weighted scale-free networks. The network evolution in these models is determined by attachment of new vertices to ends of preferentially chosen weighted edges. Resulting…

Statistical Mechanics · Physics 2007-05-23 S. N. Dorogovtsev , J. F. F. Mendes

Evolution occurs in populations of reproducing individuals. The structure of a biological population affects which traits evolve. Understanding evolutionary game dynamics in structured populations is difficult. Precise results have been…

Populations and Evolution · Quantitative Biology 2017-08-16 Benjamin Allen , Gabor Lippner , Yu-Ting Chen , Babak Fotouhi , Naghmeh Momeni , Martin A. Nowak , Shing-Tung Yau

Inspired by studies on airline networks we propose a general model for weighted networks in which topological growth and weight dynamics are both determined by cost adversarial mechanism. Since transportation networks are designed and…

Physics and Society · Physics 2007-12-10 Yihong Hu , Daoli Zhu , Yang Li , Bing Su , Bingxin Zhu

It is suggested that the degree distribution for networks of the cell-metabolism for simple organisms reflects an ubiquitous randomness. This implies that natural selection has exerted no or very little pressure on the network degree…

Biological Physics · Physics 2008-03-05 Petter Minnhagen , Sebastian Bernhardsson

Evolutionary game dynamics on networks typically consider the competition among simple strategies such as cooperation and defection in the Prisoner's Dilemma and summarize the effect of population structure as network reciprocity. However,…

Physics and Society · Physics 2024-05-31 Zijie Chen , Yuxin Geng , Xingru Chen , Feng Fu

In this paper we investigate networks whose evolution is governed by the interaction of a random assembly process and an optimization process. In the first process, new nodes are added one at a time and form connections to randomly selected…

Disordered Systems and Neural Networks · Physics 2011-05-16 Markus Brede

We describe the evolution of macromolecules as an information transmission process and apply tools from Shannon information theory to it. This allows us to isolate three independent, competing selective pressures that we term compression,…

Quantum Physics · Physics 2007-05-23 Charles Ofria , Christoph Adami , Travis C. Collier

Evolution in finite populations is often modelled using the classical Moran process. Over the last ten years this methodology has been extended to structured populations using evolutionary graph theory. An important question in any such…

Populations and Evolution · Quantitative Biology 2015-05-25 Karan Pattni , Mark Broom , Jan Rychtar , Lara J. Silvers

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

Statistical Mechanics · Physics 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

The mutual influence of dynamics and structure is a central issue in complex systems. In this paper we study by simulation slow evolution of network under the feedback of a local-majority-rule opinion process. If performance-enhancing local…

Physics and Society · Physics 2009-11-13 Zhen Shao , Haijun Zhou

In subdivided populations, migration acts together with selection and genetic drift and determines their evolution. Building up on a recently proposed method, which hinges on the emergence of a time scale separation between local and global…

Populations and Evolution · Quantitative Biology 2015-03-24 Pierangelo Lombardo , Andrea Gambassi , Luca Dall'Asta

The learning dynamics of biological brains and artificial neural networks are of interest to both neuroscience and machine learning. A key difference between them is that neural networks are often trained from a randomly initialized state…

Neural and Evolutionary Computing · Computer Science 2025-05-19 Benjamin Midler , Alejandro Pan Vazquez

We introduce and analyze a general model of a population evolving over a network of selectively neutral genotypes. We show that the population's limit distribution on the neutral network is solely determined by the network topology and…

adap-org · Physics 2009-10-31 Erik van Nimwegen , James P. Crutchfield , Martijn Huynen

We consider the edge-reinforced random walk with multiple (but finitely many) walkers which influence the edge weights together. The walker which moves at a given time step is chosen uniformly at random, or according to a fixed order.…

Probability · Mathematics 2023-11-16 Nina Gantert , Fabian Michel , Guilherme Reis

Many biological, ecological and economic systems are best described by weighted networks, as the nodes interact with each other with varying strength. However, most network models studied so far are binary, the link strength being either 0…

Disordered Systems and Neural Networks · Physics 2009-11-07 S. H. Yook , H. Jeong , A. -L. Barabasi , Y. Tu

Inspired by scientific collaboration networks, especially our empirical analysis of the network of econophysicists, an evolutionary model for weighted networks is proposed. Both degree-driven and weight-driven models are considered.…

Disordered Systems and Neural Networks · Physics 2007-05-23 Menghui Li , Jinshan Wu , Dahui Wang , Tao Zhou , Zengru Di , Ying Fan

In contrast to conventional artificial neural networks, which are structurally static, we present two approaches for evolving small networks into larger ones during training. The first method employs an auxiliary weight that directly…

Machine Learning · Computer Science 2025-07-29 Anil Radhakrishnan , John F. Lindner , Scott T. Miller , Sudeshna Sinha , William L. Ditto