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With the growing complexity of computational and experimental facilities, many scientific researchers are turning to machine learning (ML) techniques to analyze large scale ensemble data. With complexities such as multi-component workflows,…

For decades, the use of HPC systems was limited to those in the physical sciences who had mastered their domain in conjunction with a deep understanding of HPC architectures and algorithms. During these same decades, consumer computing…

This paper tries to reduce the effort of learning, deploying, and integrating several frameworks for the development of e-Science applications that combine simulations with High-Performance Data Analytics (HPDA). We propose a way to extend…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-10 Cristian Ramon-Cortes , Francesc Lordan , Jorge Ejarque , Rosa M. Badia

Scientific workflows are used to analyze large amounts of data. These workflows comprise numerous tasks, many of which are executed repeatedly, running the same custom program on different inputs. Users specify resource allocations for each…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-11 Fabian Lehmann , Jonathan Bader , Ninon De Mecquenem , Xing Wang , Vasilis Bountris , Florian Friederici , Ulf Leser , Lauritz Thamsen

High-performance computing platforms such as supercomputers have traditionally been designed to meet the compute demands of scientific applications. Consequently, they have been architected as producers and not consumers of data. The Apache…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-02-02 Andre Luckow , Ioannis Paraskevakos , George Chantzialexiou , Shantenu Jha

A key hurdle is demonstrating compute resource capability with limited benchmarks. We propose workflow templates as a solution, offering adaptable designs for specific scientific applications. Our paper identifies common usage patterns for…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-31 Gregor von Laszewski , Wesley Brewer , Sean R. Wilkinson , Andrew Shao , J. P. Fleischer , Harshad Pitkar , Christine R. Kirkpatrick , Geoffrey C. Fox

With the increasing importance of distributed scientific workflows, there is a critical need to ensure Quality of Service (QoS) constraints, such as minimizing time or limiting execution to resource subsets. However, the unpredictable…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-02 Md Hasanur Rashid , Jesun Firoz , Nathan R. Tallent , Luanzheng Guo , Meng Tang , Dong Dai

In the recent years, scientific workflows gained more and more popularity. In scientific workflows, tasks are typically treated as black boxes. Dealing with their complex interrelations to identify optimization potentials and bottlenecks is…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-13 Ansgar Lößer , Joel Witzke , Florian Schintke , Björn Scheuermann

Workflow management systems allow the users to develop complex applications at a higher level, by orchestrating functional components without handling the implementation details. Although a wide range of workflow engines are developed in…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-10-06 Alexandru Costan , Corina Stratan , Eliana-Dina Tirsa , Mugurel Ionut Andreica , Valentin Cristea

Virtual screening (VS) is a computationally intensive process crucial for drug discovery, often requiring significant resources to analyze large chemical libraries and predict ligand-protein interactions. This study evaluates the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-10 Antonio Jesús Banegas-Luna , Baldomero Imbernón Tudela , Carlos Martínez-Cortés , José María Cecilia , Horacio Pérez-Sánchez

The rise of AI and the economic dominance of cloud computing have created a new nexus of innovation for high performance computing (HPC), which has a long history of driving scientific discovery. In addition to performance needs, scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-10 Vanessa Sochat , Daniel Milroy , Abhik Sarkar , Aniruddha Marathe , Tapasya Patki

In this paper we propose a new provenance model which is tailored to a class of workflow-based applications. We motivate the approach with use cases from the astronomy community. We generalize the class of applications the approach is…

Instrumentation and Methods for Astrophysics · Physics 2010-05-26 Paul Groth , Ewa Deelman , Gideon Juve , Gaurang Mehta , Bruce Berriman

Configuring a storage system to better serve an application is a challenging task complicated by a multidimensional, discrete configuration space and the high cost of space exploration (e.g., by running the application with different…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-06-11 Lauro Beltrão Costa , Abmar Barros , Samer Al-Kiswany , Hao Yang , Emalayan Vairavanathan , Matei Ripeanu

Cloud computing technology has been one of the most critical developments in provisioning both hardware and software infrastructure in recent years. Container technology is a new cloud technology that boosts the booting of applications,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-01 Abdullah Alelyani , Ghulam Mubasher Hassan , Amitava Datta

Provenance encodes information that connects datasets, their generation workflows, and associated metadata (e.g., who or when executed a query). As such, it is instrumental for a wide range of critical governance applications (e.g.,…

The heterogeneous edge-cloud computing paradigm can provide an optimal solution to deploy scientific workflows compared to cloud computing or other traditional distributed computing environments. Owing to the different sizes of scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-17 Xin Du

Software container solutions have revolutionized application development approaches by enabling lightweight platform abstractions within the so-called "containers." Several solutions are being actively developed in attempts to bring the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-03 Maxim Belkin , Roland Haas , Galen Wesley Arnold , Hon Wai Leong , Eliu A. Huerta , David Lesny , Mark Neubauer

Climate science is critical for understanding both the causes and consequences of changes in global temperatures and has become imperative for decisive policy-making. However, climate science studies commonly require addressing complex…

Machine Learning · Computer Science 2020-09-23 Juan Carrillo , Daniel Garijo , Mark Crowley , Rober Carrillo , Yolanda Gil , Katherine Borda

Workload characterization is an integral part of performance analysis of high performance computing (HPC) systems. An understanding of workload properties sheds light on resource utilization and can be used to inform performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-16 Nikolay A. Simakov , Joseph P. White , Robert L. DeLeon , Steven M. Gallo , Matthew D. Jones , Jeffrey T. Palmer , Benjamin Plessinger , Thomas R. Furlani

Many scientific disciplines have traditionally advanced by iterating over hypotheses using labor-intensive trial-and-error, which is a slow and expensive process. Recent advances in computing, digitalization, and machine learning have…

Other Computer Science · Computer Science 2025-07-10 Carlos Sevilla-Salcedo , Armi Tiihonen , Mahsa Asadi , Kevin Sebastian Luck , Aras Umut Erarslan , Arto Klami , Samuel Kaski
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