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The fruits of science are relationships made comprehensible, often by way of approximation. While deep learning is an extremely powerful way to find relationships in data, its use in science has been hindered by the difficulty of…

Machine Learning · Computer Science 2022-04-18 Kieran A. Murphy , Dani S. Bassett

Many unsupervised hashing methods are implicitly established on the idea of reconstructing the input data, which basically encourages the hashing codes to retain as much information of original data as possible. However, this requirement…

Computer Vision and Pattern Recognition · Computer Science 2021-05-20 Zexuan Qiu , Qinliang Su , Zijing Ou , Jianxing Yu , Changyou Chen

Modern neural networks tend to be overconfident on unseen, noisy or incorrectly labelled data and do not produce meaningful uncertainty measures. Bayesian deep learning aims to address this shortcoming with variational approximations (such…

Machine Learning · Statistics 2018-05-28 Nick Pawlowski , Andrew Brock , Matthew C. H. Lee , Martin Rajchl , Ben Glocker

Concept bottleneck models (CBMs) improve neural network interpretability by introducing an intermediate layer that maps human-understandable concepts to predictions. Recent work has explored the use of vision-language models (VLMs) to…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Xingbo Du , Qiantong Dou , Lei Fan , Rui Zhang

In this paper, we present a strategy for training convolutional neural networks to effectively resolve interference arising from competing hypotheses relating to inter-categorical information throughout the network. The premise is based on…

Computer Vision and Pattern Recognition · Computer Science 2020-08-14 Md Amirul Islam , Matthew Kowal , Konstantinos G. Derpanis , Neil D. B. Bruce

Although link prediction on graphs has achieved great success with the development of graph neural networks (GNNs), the potential robustness under the edge noise is still less investigated. To close this gap, we first conduct an empirical…

Machine Learning · Computer Science 2023-11-03 Zhanke Zhou , Jiangchao Yao , Jiaxu Liu , Xiawei Guo , Quanming Yao , Li He , Liang Wang , Bo Zheng , Bo Han

Federated learning has become a promising solution for collaboration among medical institutions. However, data owned by each institution would be highly heterogeneous and the distribution is always non-independent and identical distribution…

Machine Learning · Computer Science 2024-12-25 Guochen Yan , Luyuan Xie , Xinyi Gao , Wentao Zhang , Qingni Shen , Yuejian Fang , Zhonghai Wu

Deep learning has become the most powerful machine learning tool in the last decade. However, how to efficiently train deep neural networks remains to be thoroughly solved. The widely used minibatch stochastic gradient descent (SGD) still…

Machine Learning · Computer Science 2021-05-18 Xinyu Peng , Jiawei Zhang , Fei-Yue Wang , Li Li

Genetic screens mediated via CRISPR-Cas9 combined with high-content readouts have emerged as powerful tools for biological discovery. However, computational analyses of these screens come with additional challenges beyond those found with…

Quantitative Methods · Quantitative Biology 2024-11-14 Ethan Weinberger , Ryan Conrad , Tal Ashuach

We propose a novel information bottleneck (IB) method named Drop-Bottleneck, which discretely drops features that are irrelevant to the target variable. Drop-Bottleneck not only enjoys a simple and tractable compression objective but also…

Machine Learning · Computer Science 2021-03-24 Jaekyeom Kim , Minjung Kim , Dongyeon Woo , Gunhee Kim

Deep Learning has a hierarchical network architecture to represent the complicated feature of input patterns. The adaptive structural learning method of Deep Belief Network (DBN) has been developed. The method can discover an optimal number…

Neural and Evolutionary Computing · Computer Science 2018-08-28 Shin Kamada , Takumi Ichimura , Toshihide Harada

Recently, visual perception (VP) and visual imagery (VI) paradigms are investigated in several brain-computer interface (BCI) studies. VP and VI are defined as a changing of brain signals when perceiving and memorizing visual information,…

Neurons and Cognition · Quantitative Biology 2021-02-08 Ji-Seon Bang , Ji-Hoon Jeong , Dong-Ok Won

We investigate the potential of stochastic neural networks for learning effective waveform-based acoustic models. The waveform-based setting, inherent to fully end-to-end speech recognition systems, is motivated by several comparative…

Machine Learning · Statistics 2021-08-17 Dino Oglic , Zoran Cvetkovic , Peter Sollich

Deep neural networks have excelled in machine learning, particularly in vision tasks, however, they often suffer from catastrophic forgetting when learning new tasks sequentially. In this work, we introduce Cobweb4V, an alternative to…

Machine Learning · Computer Science 2024-09-20 Nicki Barari , Xin Lian , Christopher J. MacLellan

Convolutional neural networks (CNN) have enabled major advances in image classification through convolution and pooling. In particular, image pooling transforms a connected discrete grid into a reduced grid with the same connectivity and…

Machine Learning · Computer Science 2022-08-04 Stevan Stanovic , Benoit Gaüzère , Luc Brun

Feedforward neural networks (FNNs) can be viewed as non-linear regression models, where covariates enter the model through a combination of weighted summations and non-linear functions. Although these models have some similarities to the…

Methodology · Statistics 2024-05-02 Andrew McInerney , Kevin Burke

Biological systems leverage top-down feedback for visual processing, yet most artificial vision models succeed in image classification using purely feedforward or recurrent architectures, calling into question the functional significance of…

Neurons and Cognition · Quantitative Biology 2025-08-12 Antonino Greco , Marco D'Alessandro , Karl J. Friston , Giovanni Pezzulo , Markus Siegel

Remote sensing segmentation has a wide range of applications in environmental protection, and urban change detection, etc. Despite the success of deep learning-based remote sensing segmentation methods (e.g., CNN and Transformer), they are…

Computer Vision and Pattern Recognition · Computer Science 2025-10-23 Yuntao Shou , Wei Ai , Tao Meng , Nan Yin

The success of Graph Neural Networks (GNNs) has led to a need for understanding their decision-making process and providing explanations for their predictions, which has given rise to explainable AI (XAI) that offers transparent…

Machine Learning · Computer Science 2024-02-21 Sangwoo Seo , Sungwon Kim , Chanyoung Park

We present a simple, modular graph-based convolutional neural network that takes structural information from protein-ligand complexes as input to generate models for activity and binding mode prediction. Complex structures are generated by…

Biomolecules · Quantitative Biology 2020-02-26 Joseph A. Morrone , Jeffrey K. Weber , Tien Huynh , Heng Luo , Wendy D. Cornell