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The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…

Computational Complexity · Computer Science 2022-02-04 Jessica Enright , Martin Pergel

In this paper we show how to find nearly optimal embeddings of large trees in several natural classes of graphs. The size of the tree T can be as large as a constant fraction of the size of the graph G, and the maximum degree of T can be…

Combinatorics · Mathematics 2007-07-17 Benny Sudakov , Jan Vondrak

Our main result is a full classification, for every connected graph $H$, of the computational complexity of Steiner Forest on $H$-subgraph-free graphs. To obtain this dichotomy, we establish the following new algorithmic, hardness, and…

Graph neural networks have been successful in many learning problems and real-world applications. A recent line of research explores the power of graph neural networks to solve combinatorial and graph algorithmic problems such as subgraph…

Machine Learning · Computer Science 2021-08-20 Reyan Ahmed , Md Asadullah Turja , Faryad Darabi Sahneh , Mithun Ghosh , Keaton Hamm , Stephen Kobourov

Polytrees are a subclass of Bayesian networks that seek to capture the conditional dependencies between a set of $n$ variables as a directed forest and are motivated by their more efficient inference and improved interpretability. Since the…

Data Structures and Algorithms · Computer Science 2026-05-06 Juha Harviainen , Frank Sommer , Manuel Sorge

We consider two problems for a directed graph $G$, which we show to be closely related. The first one is to find $k$ edge-disjoint forests in $G$ of maximal size such that the indegree of each vertex in these forests is at most $k$. We…

Data Structures and Algorithms · Computer Science 2025-10-16 Pavel Arkhipov , Vladimir Kolmogorov

Let $G=(V,E)$ and $H$ be two graphs. Packing problem is to find in $G$ the largest number of independent subgraphs each of which is isomorphic to $H$. Let $U\subset{V}$. If the graph $G-U$ has no subgraph isomorphic to $H$, $U$ is a cover…

Combinatorics · Mathematics 2013-09-17 Jia Zhao , Jianfeng Guan , Changqiao Xu , Hongke Zhang

Given a graph $G=(V,E)$ with a weight $w_v$ associated with each vertex $v\in V$, the maximum weighted induced forest problem (MWIF) consists of encountering a maximum weighted subset $V'\subseteq V$ of the vertices such that $V'$ induces a…

Optimization and Control · Mathematics 2021-12-06 Rafael A. Melo , Celso C. Ribeiro

The kTree problem is a special case of Subgraph Isomorphism where the pattern graph is a tree, that is, the input is an $n$-node graph $G$ and a $k$-node tree $T$, and the goal is to determine whether $G$ has a subgraph isomorphic to $T$.…

Data Structures and Algorithms · Computer Science 2018-04-10 Robert Krauthgamer , Ohad Trabelsi

We propose the following conjecture: For every fixed $\alpha\in [0,\frac 13)$, each graph of minimum degree at least $(1+\alpha)\frac k2$ and maximum degree at least $2(1-\alpha)k$ contains each tree with $k$ edges as a subgraph. Our main…

Combinatorics · Mathematics 2020-08-13 Guido Besomi , Matías Pavez-Signé , Maya Stein

(Induced) Subgraph Isomorphism and Maximum Common (Induced) Subgraph are fundamental problems in graph pattern matching and similarity computation. In graphs derived from time-series data or protein structures, a natural total ordering of…

Data Structures and Algorithms · Computer Science 2025-07-17 Haruya Imamura , Yasuaki Kobayashi , Yota Otachi , Toshiki Saitoh , Keita Sato , Asahi Takaoka , Ryo Yoshinaka , Tom C. van der Zanden

A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Hing-Fung Ting

This paper proposes a new general technique for maximal subgraph enumeration which we call proximity search, whose aim is to design efficient enumeration algorithms for problems that could not be solved by existing frameworks. To support…

Data Structures and Algorithms · Computer Science 2021-08-19 Alessio Conte , Andrea Marino , Roberto Grossi , Takeaki Uno , Luca Versari

We give a 2-approximation algorithm for the Maximum Agreement Forest problem on two rooted binary trees. This NP-hard problem has been studied extensively in the past two decades, since it can be used to compute the Subtree…

Data Structures and Algorithms · Computer Science 2016-04-29 Frans Schalekamp , Anke van Zuylen , Suzanne van der Ster

An added edge to a graph is called an inset edge. Predicting k inset edges which minimize the average distance of a graph is known to be NP-Hard. However, when k = 1 the complexity of the problem is polynomial. In this paper, some tools for…

Computational Complexity · Computer Science 2020-08-14 M. H. Khalifeh , A. -H. Esfahanian

A spanning subgraph $F$ of a graph $G$ is called {\em perfect} if $F$ is a forest, the degree $d_F(x)$ of each vertex $x$ in $F$ is odd, and each tree of $F$ is an induced subgraph of $G$. Alex Scott (Graphs \& Combin., 2001) proved that…

Discrete Mathematics · Computer Science 2015-11-06 Gregory Gutin , Anders Yeo

We consider the $H$-Induced Minor problem: for a fixed graph~$H$, decide whether a given graph $G$ contains $H$ as an induced minor. While the problem is known to be NP-complete for some trees~$H$ on more than $2^{300}$ vertices, the…

Combinatorics · Mathematics 2026-04-28 Tala Eagling-Vose , Barnaby Martin , Daniël Paulusma , Nicolas Trotignon

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen

Albertson and Berman conjectured that every planar graph has an induced forest on half of its vertices. The best known lower bound, due to Borodin, is that every planar graph has an induced forest on two fifths of its vertices. In a related…

Combinatorics · Mathematics 2026-03-19 Glencora Borradaile , Hung Le , Melissa Sherman-Bennett

We prove that for any positive integers $k$ and $d$, if a graph $G$ has maximum average degree at most $2k + \frac{2d}{d+k+1}$, then $G$ decomposes into $k+1$ pseudoforests $C_{1},\ldots,C_{k+1}$ such that there is an $i$ such that for…

Combinatorics · Mathematics 2020-07-07 Logan Grout , Benjamin Moore