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Discovering patterns in data that best describe the differences between classes allows to hypothesize and reason about class-specific mechanisms. In molecular biology, for example, this bears promise of advancing the understanding of…

Machine Learning · Computer Science 2023-12-08 Nils Philipp Walter , Jonas Fischer , Jilles Vreeken

Motivation: Automatic Anatomical Therapeutic Chemical (ATC) classification is a critical and highly competitive area of research in bioinformatics because of its potential for expediting drug develop-ment and research. Predicting an unknown…

Quantitative Methods · Quantitative Biology 2021-08-09 Loris Nanni , Alessandra Lumini , Sheryl Brahnam

The ability to compare complex systems can provide new insight into the fundamental nature of the processes captured in ways that are otherwise inaccessible to observation. Here, we introduce the $n$-tangle method to directly compare two…

Physics and Society · Physics 2014-11-27 Lazaros K. Gallos , Nina H. Fefferman

Upon a matrix representation of a binary bipartite network, via the permutation invariance, a coupling geometry is computed to approximate the minimum energy macrostate of a network's system. Such a macrostate is supposed to constitute the…

Applications · Statistics 2018-02-02 Jiahui Guan , Hsieh Fushing

Various modifications of decision trees have been extensively used during the past years due to their high efficiency and interpretability. Tree node splitting based on relevant feature selection is a key step of decision tree learning, at…

Machine Learning · Computer Science 2017-09-05 Dmitry Ignatov , Andrey Ignatov

Complex systems are usually represented as an intricate set of relations between their components forming a complex graph or network. The understanding of their functioning and emergent properties are strongly related to their structural…

Data Analysis, Statistics and Probability · Physics 2014-01-08 Sergio Gomez , Alberto Fernandez , Clara Granell , Alex Arenas

In data lakes, information on the same subject is often fragmented across multiple tables. Table union search aims to find the top-k tables that can be unioned with a query table to extend it with more rows, without relying on metadata or…

Databases · Computer Science 2026-03-19 Yongkang Sun , Zhihao Ding , Huiqiang Wang , Reynold Cheng , Jieming Shi

Tractography from high-dimensional diffusion magnetic resonance imaging (dMRI) data allows brain's structural connectivity analysis. Recent dMRI studies aim to compare connectivity patterns across subject groups and disease populations to…

The field of neuroscience is facing an unprecedented expanse in the volume and diversity of available data. Traditionally, network models have provided key insights into the structure and function of the brain. With the advent of big data…

Neurons and Cognition · Quantitative Biology 2018-02-14 Michael Vaiana , Sarah Muldoon

This paper considers joint analysis of multiple functionally related structures in classification tasks. In particular, our method developed is driven by how functionally correlated brain structures vary together between autism and control…

Machine Learning · Statistics 2021-09-08 Zhiyuan Liu , Jörn Schulz , Mohsen Taheri , Martin Styner , James Damon , Stephen Pizer , J. S. Marron

A similarity network is a tool for constructing belief networks for the diagnosis of a single fault. In this paper, we examine modifications to the similarity-network representation that facilitate the construction of belief networks for…

Artificial Intelligence · Computer Science 2015-05-19 David Heckerman

The first phase of table recognition is to detect the tabular area in a document. Subsequently, the tabular structures are recognized in the second phase in order to extract information from the respective cells. Table detection and…

Computer Vision and Pattern Recognition · Computer Science 2021-05-11 Khurram Azeem Hashmi , Marcus Liwicki , Didier Stricker , Muhammad Adnan Afzal , Muhammad Ahtsham Afzal , Muhammad Zeshan Afzal

We present a novel deep-learning-based method to cluster words in documents which we apply to detect and recognize tables given the OCR output. We interpret table structure bottom-up as a graph of relations between pairs of words (belonging…

Machine Learning · Computer Science 2024-05-24 Marek Polewczyk , Marco Spinaci

Many data-science applications involve detecting a shared signal between two high-dimensional variables. Using random matrix theory methods, we determine when such signal can be detected and reconstructed from sample correlations, despite…

Disordered Systems and Neural Networks · Physics 2026-04-07 Arabind Swain , Sean Alexander Ridout , Ilya Nemenman

We consider a problem in Multi-Task Learning (MTL) where multiple linear models are jointly trained on a collection of datasets ("tasks"). A key novelty of our framework is that it allows the sparsity pattern of regression coefficients and…

Recently, significant progress has been made applying machine learning to the problem of table structure inference and extraction from unstructured documents. However, one of the greatest challenges remains the creation of datasets with…

Machine Learning · Computer Science 2021-11-22 Brandon Smock , Rohith Pesala , Robin Abraham

Over the past decade a wide spectrum of machine learning models have been developed to model the neurodegenerative diseases, associating biomarkers, especially non-intrusive neuroimaging markers, with key clinical scores measuring the…

Machine Learning · Computer Science 2018-03-02 Mengying Sun , Inci M. Baytas , Liang Zhan , Zhangyang Wang , Jiayu Zhou

Early diagnosis of interstitial lung diseases is crucial for their treatment, but even experienced physicians find it difficult, as their clinical manifestations are similar. In order to assist with the diagnosis, computer-aided diagnosis…

Computer Vision and Pattern Recognition · Computer Science 2016-12-13 Stergios Christodoulidis , Marios Anthimopoulos , Lukas Ebner , Andreas Christe , Stavroula Mougiakakou

We consider the problem of estimating multiple related but distinct graphical models on the basis of a high-dimensional data set with observations that belong to distinct classes. A motivating example occurs in the analysis of gene…

Methodology · Statistics 2012-07-12 Patrick Danaher , Pei Wang , Daniela M. Witten

Modern social networks frequently encompass multiple distinct types of connectivity information; for instance, explicitly acknowledged friend relationships might complement behavioral measures that link users according to their actions or…

Social and Information Networks · Computer Science 2015-06-17 Brandon Oselio , Alex Kulesza , Alfred O. Hero
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