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The COVID-19 pandemic has spawned a diverse body of scientific literature that is challenging to navigate, stimulating interest in automated tools to help find useful knowledge. We pursue the construction of a knowledge base (KB) of…

Computation and Language · Computer Science 2021-04-20 Tom Hope , Aida Amini , David Wadden , Madeleine van Zuylen , Sravanthi Parasa , Eric Horvitz , Daniel Weld , Roy Schwartz , Hannaneh Hajishirzi

The emergence of the novel COVID-19 pandemic has had a significant impact on global healthcare and the economy over the past few months. The virus's rapid widespread has led to a proliferation in biomedical research addressing the pandemic…

Artificial Intelligence · Computer Science 2020-07-21 Chongyan Chen , Islam Akef Ebeid , Yi Bu , Ying Ding

The COVID-19 pandemic has magnified an already existing trend of people looking for healthcare solutions online. One class of solutions are symptom checkers, which have become very popular in the context of COVID-19. Traditional symptom…

Artificial Intelligence · Computer Science 2020-12-02 Anitha Kannan , Richard Chen , Vignesh Venkataraman , Geoffrey J. Tso , Xavier Amatriain

We are presenting COVID-19Base, a knowledgebase highlighting the biomedical entities related to COVID-19 disease based on literature mining. To develop COVID-19Base, we mine the information from publicly available scientific literature and…

As scientists worldwide search for answers to the overwhelmingly unknown behind the deadly pandemic, the literature concerning COVID-19 has been growing exponentially. Keeping abreast of the body of literature at such a rapidly advancing…

Digital Libraries · Computer Science 2020-12-24 Chaomei Chen

The coronavirus disease (COVID-19) has claimed the lives of over 350,000 people and infected more than 6 million people worldwide. Several search engines have surfaced to provide researchers with additional tools to find and retrieve…

To combat COVID-19, both clinicians and scientists need to digest vast amounts of relevant biomedical knowledge in scientific literature to understand the disease mechanism and related biological functions. We have developed a novel and…

The COVID-19 crisis has emphasized the need for scientific methods such as machine learning to speed up the discovery of solutions to the pandemic. Harnessing machine learning techniques requires quality data, skilled personnel and advanced…

Since the World Health Organization declared COVID-19 a pandemic in 2020, the global community has faced ongoing challenges in controlling and mitigating the transmission of the SARS-CoV-2 virus, as well as its evolving subvariants and…

Machine Learning · Computer Science 2023-10-19 Hossein Aboutalebi , Maya Pavlova , Mohammad Javad Shafiee , Adrian Florea , Andrew Hryniowski , Alexander Wong

We present CAiRE-COVID, a real-time question answering (QA) and multi-document summarization system, which won one of the 10 tasks in the Kaggle COVID-19 Open Research Dataset Challenge, judged by medical experts. Our system aims to tackle…

Computation and Language · Computer Science 2020-12-09 Dan Su , Yan Xu , Tiezheng Yu , Farhad Bin Siddique , Elham J. Barezi , Pascale Fung

Causal machine learning (ML) algorithms recover graphical structures that tell us something about cause-and-effect relationships. The causal representation praovided by these algorithms enables transparency and explainability, which is…

Structural causal models (SCMs) provide a principled approach to identifying causation from observational and experimental data in disciplines ranging from economics to medicine. However, SCMs, which is typically represented as graphical…

The world has faced the devastating outbreak of Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2), or COVID-19, in 2020. Research in the subject matter was fast-tracked to such a point that scientists were struggling to keep up…

Information Retrieval · Computer Science 2020-09-03 Maksim Ekin Eren , Nick Solovyev , Edward Raff , Charles Nicholas , Ben Johnson

An accurate and efficient forecasting system is imperative to the prevention of emerging infectious diseases such as COVID-19 in public health. This system requires accurate transient modeling, lower computation cost, and fewer observation…

Machine Learning · Computer Science 2021-01-26 Dongdong Wang , Shunpu Zhang , Liqiang Wang

The sudden outbreak and uncontrolled spread of COVID-19 disease is one of the most important global problems today. In a short period of time, it has led to the development of many deep neural network models for COVID-19 detection with…

Image and Video Processing · Electrical Eng. & Systems 2021-08-09 Weronika Hryniewska , Przemysław Bombiński , Patryk Szatkowski , Paulina Tomaszewska , Artur Przelaskowski , Przemysław Biecek

In late 2019, COVID-19, a severe respiratory disease, emerged, and since then, the world has been facing a deadly pandemic caused by it. This ongoing pandemic has had a significant effect on different aspects of societies. The uncertainty…

Neural and Evolutionary Computing · Computer Science 2021-09-28 Mahdi Rahbar , Samaneh Yazdani

The COVID-19 pandemic is accompanied by a massive "infodemic" that makes it hard to identify concise and credible information for COVID-19-related questions, like incubation time, infection rates, or the effectiveness of vaccines. As a…

Computation and Language · Computer Science 2022-04-20 Johannes Graf , Gino Lancho , Patrick Zschech , Kai Heinrich

Knowledge graph embedding (KGE) focuses on representing the entities and relations of a knowledge graph (KG) into the continuous vector spaces, which can be employed to predict the missing triples to achieve knowledge graph completion…

Computation and Language · Computer Science 2023-07-25 Yichi Zhang , Wen Zhang

Counterfactual inference is a useful tool for comparing outcomes of interventions on complex systems. It requires us to represent the system in form of a structural causal model, complete with a causal diagram, probabilistic assumptions on…

The COVID-19 pandemic represents the most significant public health disaster since the 1918 influenza pandemic. During pandemics such as COVID-19, timely and reliable spatio-temporal forecasting of epidemic dynamics is crucial. Deep…

Machine Learning · Computer Science 2020-11-25 Lijing Wang , Aniruddha Adiga , Srinivasan Venkatramanan , Jiangzhuo Chen , Bryan Lewis , Madhav Marathe
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