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Graphs are a central representation in biomedical research, capturing molecular interaction networks, gene regulatory circuits, cell--cell communication maps, and knowledge graphs. Despite their importance, currently there is not a broadly…

Machine Learning · Computer Science 2026-04-09 Sakib Mostafa , Lei Xing , Md. Tauhidul Islam

We develop a rewriting theory suitable for diagrammatic algebras and lay down the foundations of a systematic study of their higher structures. In this paper, we focus on the question of finding bases. As an application, we give the first…

Representation Theory · Mathematics 2025-02-06 Léo Schelstraete

We extend unified correspondence theory to Kripke frames with impossible worlds and their associated regular modal logics. These are logics the modal connectives of which are not required to be normal: only the weaker properties of…

Logic · Mathematics 2016-05-27 Alessandra Palmigiano , Sumit Sourabh , Zhiguang Zhao

This paper introduces a new family of cognitive modal logics designed to formalize conjectural reasoning: modal systems in which cognitive contexts extend known facts with hypothetical assumptions in order to explore their consequences.…

Logic in Computer Science · Computer Science 2026-03-24 Fabio Vitali

Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful…

Machine Learning · Computer Science 2018-03-12 Yujia Li , Oriol Vinyals , Chris Dyer , Razvan Pascanu , Peter Battaglia

In this paper, we propose a general framework for constructing tight framelet systems on graphs with localized supports based on partition trees. Our construction of framelets provides a simple and efficient way to obtain the orthogonality…

Signal Processing · Electrical Eng. & Systems 2025-09-09 Ruigang Zheng , Xiaosheng Zhuang

We conjecture that the relative unpopularity of logical frameworks among practitioners is partly due to their complex meta-languages, which often demand both programming skills and theoretical knowledge of the meta-language in question for…

Logic in Computer Science · Computer Science 2021-06-29 Bruno Cuconato , Jefferson de Barros Santos , Edward Hermann Haeusler

We further develop the algebraic approach to input/output logic initiated in \cite{wollic22}, where subordination algebras and a family of their generalizations were proposed as a semantic environment of various input/output logics. In…

Logic in Computer Science · Computer Science 2024-12-03 Andrea De Domenico , Ali Farjami , Krishna Manoorkar , Alessandra Palmigiano , Mattia Panettiere , Xiaolong Wang

Foundation models excel at language, where sentences become tokens, and vision, where images become pixels, because both reduce to discrete symbols on a shared, fixed grid. Knowledge Graphs share the discreteness, but not the geometry.…

Artificial Intelligence · Computer Science 2026-05-08 Kossi Amouzouvi , Robert Wardenga , Jens Lehmann , Sahar Vahdati

We study first order equations of continuity and transport type on metric spaces of martingale dimension one, including finite metric graphs, p.c.f. self-similar sets and classical Sierpi\'nski carpets. On such spaces solutions of the…

Analysis of PDEs · Mathematics 2024-12-12 Michael Hinz , Waldemar Schefer

Series-parallel (SP) graphs are binary edge-labeled graphs with a designated source and target vertex, built using serial and parallel composition. A set of graphs is recognizable if membership depends only on its image under a homomorphism…

Formal Languages and Automata Theory · Computer Science 2026-04-28 Marius Bozga , Radu Iosif , Florian Zuleger

Many scientific datasets are of high dimension, and the analysis usually requires visual manipulation by retaining the most important structures of data. Principal curve is a widely used approach for this purpose. However, many existing…

Artificial Intelligence · Computer Science 2016-01-19 Qi Mao , Li Wang , Ivor W. Tsang , Yijun Sun

Semantic knowledge graphs are foundational to implementing the FAIR Principles, yet RDF/OWL representations often lack the semantic flexibility and cognitive interoperability required in scientific domains. We present a novel framework for…

Databases · Computer Science 2025-06-09 Lars Vogt

The one-variable fragment of a first-order logic may be viewed as an "S5-like" modal logic, where the universal and existential quantifiers are replaced by box and diamond modalities, respectively. Axiomatizations of these modal logics have…

Logic · Mathematics 2024-11-20 Petr Cintula , George Metcalfe , Naomi Tokuda

The dominant paradigm for relation prediction in knowledge graphs involves learning and operating on latent representations (i.e., embeddings) of entities and relations. However, these embedding-based methods do not explicitly capture the…

Machine Learning · Computer Science 2020-02-13 Komal K. Teru , Etienne Denis , William L. Hamilton

A dialectical rough set theory focussed on the relation between roughly equivalent objects and classical objects was introduced in \cite{AM699} by the present author. The focus of our investigation is on elucidating the minimal conditions…

Logic · Mathematics 2009-09-29 A. Mani

We show that it is equivalent, for certain sets of finite graphs, to be definable in CMS (counting monadic second-order logic, a natural extension of monadic second-order logic), and to be recognizable in an algebraic framework induced by…

Logic in Computer Science · Computer Science 2007-05-23 Pascal Weil

Graphs, as a relational data structure, have been widely used for various application scenarios, like molecule design and recommender systems. Recently, large language models (LLMs) are reorganizing in the AI community for their expected…

Artificial Intelligence · Computer Science 2025-02-19 Dongqi Fu , Liri Fang , Zihao Li , Hanghang Tong , Vetle I. Torvik , Jingrui He

We study the complexity of fundamental distributed graph problems in the recently popular setting where information about the input graph is available to the nodes before the start of the computation. We focus on the most common such…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-03 Alkida Balliu , Thomas Boudier , Sebastian Brandt , Dennis Olivetti

Given a compact metric graph $\Gamma$ and the Laplacian $\Delta_{\Gamma}$ coupled with standard (Kirchhoff) vertex conditions, solutions to fractional elliptic partial differential equations of the form $(\kappa^2 -…

Analysis of PDEs · Mathematics 2025-12-16 Elsiddig Awadelkarim , David Bolin , Alexandre B. Simas