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Spectral graph neural networks (GNNs) learn graph representations via spectral-domain graph convolutions. However, most existing spectral graph filters are scalar-to-scalar functions, i.e., mapping a single eigenvalue to a single filtered…

Machine Learning · Computer Science 2023-03-03 Deyu Bo , Chuan Shi , Lele Wang , Renjie Liao

Besides natural language processing, transformers exhibit extraordinary performance in solving broader applications, including scientific computing and computer vision. Previous works try to explain this from the expressive power and…

Machine Learning · Computer Science 2025-01-13 Yihang Gao , Chuanyang Zheng , Enze Xie , Han Shi , Tianyang Hu , Yu Li , Michael K. Ng , Zhenguo Li , Zhaoqiang Liu

While a considerable amount of semantic parsing approaches have employed RNN architectures for code generation tasks, there have been only few attempts to investigate the applicability of Transformers for this task. Including hierarchical…

Computation and Language · Computer Science 2022-06-28 Klaudia-Doris Thellmann , Bernhard Stadler , Ricardo Usbeck , Jens Lehmann

Graph transformers are a recent advancement in machine learning, offering a new class of neural network models for graph-structured data. The synergy between transformers and graph learning demonstrates strong performance and versatility…

Machine Learning · Computer Science 2025-12-23 Ahsan Shehzad , Feng Xia , Shagufta Abid , Ciyuan Peng , Shuo Yu , Dongyu Zhang , Karin Verspoor

Interpretation and explanation of deep models is critical towards wide adoption of systems that rely on them. In this paper, we propose a novel scheme for both interpretation as well as explanation in which, given a pretrained model, we…

Computer Vision and Pattern Recognition · Computer Science 2019-03-11 Jose Oramas , Kaili Wang , Tinne Tuytelaars

Computer programming textbooks and software documentations often contain flowcharts to illustrate the flow of an algorithm or procedure. Modern OCR engines often tag these flowcharts as graphics and ignore them in further processing. In…

Computer Vision and Pattern Recognition · Computer Science 2025-01-30 Shreya Shukla , Prajwal Gatti , Yogesh Kumar , Vikash Yadav , Anand Mishra

Representation learning on networks aims to derive a meaningful vector representation for each node, thereby facilitating downstream tasks such as link prediction, node classification, and node clustering. In heterogeneous text-rich…

Computation and Language · Computer Science 2023-06-06 Bowen Jin , Yu Zhang , Qi Zhu , Jiawei Han

Graph Neural Networks (GNNs) are widely used in graph data mining tasks. Traditional GNNs follow a message passing scheme that can effectively utilize local and structural information. However, the phenomena of over-smoothing and…

Machine Learning · Computer Science 2025-04-14 Zijie Zhou , Zhaoqi Lu , Xuekai Wei , Rongqin Chen , Shenghui Zhang , Pak Lon Ip , Leong Hou U

Neural networks that process the parameters of other neural networks find applications in domains as diverse as classifying implicit neural representations, generating neural network weights, and predicting generalization errors. However,…

Transformer-based architectures have advanced medical image analysis by effectively modeling long-range dependencies, yet they often struggle in 3D settings due to substantial memory overhead and insufficient capture of fine-grained local…

Autoencoders are effective deep learning models that can function as generative models and learn latent representations for downstream tasks. The use of graph autoencoders - with both encoder and decoder implemented as message passing…

Machine Learning · Computer Science 2025-03-04 Magnus Cunow , Gerrit Großmann

Graph Transformers have garnered significant attention for learning graph-structured data, thanks to their superb ability to capture long-range dependencies among nodes. However, the quadratic space and time complexity hinders the…

Information Retrieval · Computer Science 2024-05-08 Huiyuan Chen , Zhe Xu , Chin-Chia Michael Yeh , Vivian Lai , Yan Zheng , Minghua Xu , Hanghang Tong

Learning-based fluid simulation networks have been proven as viable alternatives to traditional numerical solvers for the Navier-Stokes equations. Existing neural methods follow Smoothed Particle Hydrodynamics (SPH) frameworks, which…

Computational Engineering, Finance, and Science · Computer Science 2025-08-05 Nianyi Wang , Yu Chen , Shuai Zheng

Graph Neural Networks (GNNs) have emerged as promising solutions for collaborative filtering (CF) through the modeling of user-item interaction graphs. The nucleus of existing GNN-based recommender systems involves recursive message passing…

Machine Learning · Computer Science 2024-05-21 Peiyan Zhang , Yuchen Yan , Xi Zhang , Chaozhuo Li , Senzhang Wang , Feiran Huang , Sunghun Kim

Normalizing flows (NFs) have become a prominent method for deep generative models that allow for an analytic probability density estimation and efficient synthesis. However, a flow-based network is considered to be inefficient in parameter…

Machine Learning · Computer Science 2020-10-26 Sang-gil Lee , Sungwon Kim , Sungroh Yoon

Neural methods of molecule property prediction require efficient encoding of structure and property relationship to be accurate. Recent work using graph algorithms shows limited generalization in the latent molecule encoding space. We build…

Quantitative Methods · Quantitative Biology 2020-11-26 Prateeth Nayak , Andrew Silberfarb , Ran Chen , Tulay Muezzinoglu , John Byrnes

The ability of reasoning beyond data fitting is substantial to deep learning systems in order to make a leap forward towards artificial general intelligence. A lot of efforts have been made to model neural-based reasoning as an iterative…

Artificial Intelligence · Computer Science 2019-05-31 Xiaoran Xu , Wei Feng , Zhiqing Sun , Zhi-Hong Deng

Link prediction is a common task on graph-structured data that has seen applications in a variety of domains. Classically, hand-crafted heuristics were used for this task. Heuristic measures are chosen such that they correlate well with the…

Machine Learning · Computer Science 2024-06-28 Harry Shomer , Yao Ma , Haitao Mao , Juanhui Li , Bo Wu , Jiliang Tang

Human language is known to exhibit a nested, hierarchical structure, allowing us to form complex sentences out of smaller pieces. However, many state-of-the-art neural networks models such as Transformers have no explicit hierarchical…

Computation and Language · Computer Science 2023-07-12 Nilay Patel , Jeffrey Flanigan

Vision Transformers have shown great performance in single tasks such as classification and segmentation. However, real-world problems are not isolated, which calls for vision transformers that can perform multiple tasks concurrently.…

Computer Vision and Pattern Recognition · Computer Science 2023-04-21 Yang Liu , Shen Yan , Yuge Zhang , Kan Ren , Quanlu Zhang , Zebin Ren , Deng Cai , Mi Zhang