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Related papers: An Upper Bound on the Weisfeiler-Leman Dimension

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A dynamic graph algorithm is a data structure that answers queries about a property of the current graph while supporting graph modifications such as edge insertions and deletions. Prior work has shown strong conditional lower bounds for…

Data Structures and Algorithms · Computer Science 2023-01-30 Monika Henzinger , Ami Paz , A. R. Sricharan

As a classical approach on graph learning, the propagation-aggregation methodology is widely exploited by many of Graph Neural Networks (GNNs), wherein the representation of a node is updated by aggregating representations from itself and…

Machine Learning · Computer Science 2025-12-08 Xiao Yue , Bo Liu , Feng Zhang , Guangzhi Qu

Weisfeiler-Leman Features (WLFs) are a recently introduced classical machine learning tool for learning to plan and search. They have been shown to be both theoretically and empirically superior to existing deep learning approaches for…

Artificial Intelligence · Computer Science 2025-08-27 Dillon Z. Chen

Formulating optimization problems for industrial applications demands significant manual effort and domain expertise. While Large Language Models (LLMs) show promise in automating this process, evaluating their performance remains difficult…

Machine Learning · Computer Science 2025-11-03 Zhuohan Wang , Ziwei Zhu , Ziniu Li , Congliang Chen , Yizhou Han , Yufeng Lin , Zhihang Lin , Angyang Gu , Xinglin Hu , Ruoyu Sun , Tian Ding

Accurate RNA secondary structure prediction is vital for understanding cellular regulation and disease mechanisms. Deep learning (DL) methods have surpassed traditional algorithms by predicting complex features like pseudoknots and…

Biomolecules · Quantitative Biology 2024-01-12 Frederic Runge , Jörg K. H. Franke , Daniel Fertmann , Frank Hutter

This paper is devoted to advancing the theoretical understanding of the iterated immediate snapshot (IIS) complexity of the Weak Symmetry Breaking task (WSB). Our rather unexpected main theorem states that there exist infinitely many values…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-02-24 Dmitry N. Kozlov

Let $G$ be a graph, and let $u$, $v$, and $w$ be vertices of $G$. If the distance between $u$ and $w$ does not equal the distance between $v$ and $w$, then $w$ is said to resolve $u$ and $v$. The metric dimension of $G$, denoted $\beta(G)$,…

Combinatorics · Mathematics 2020-01-28 Lucas Mol , Matthew J. H. Murphy , Ortrud R. Oellermann

In this paper, we present a novel interpretation of the so-called Weisfeiler-Lehman (WL) distance, introduced by Chen et al. (2022), using concepts from stochastic processes. The WL distance aims at comparing graphs with node features, has…

Machine Learning · Computer Science 2023-10-03 Samantha Chen , Sunhyuk Lim , Facundo Mémoli , Zhengchao Wan , Yusu Wang

The Weisfeiler-Lehman graph kernels are among the most prevalent graph kernels due to their remarkable time complexity and predictive performance. Their key concept is based on an implicit comparison of neighborhood representing trees with…

Machine Learning · Computer Science 2021-01-21 Till Hendrik Schulz , Tamás Horváth , Pascal Welke , Stefan Wrobel

The ability of graph neural networks (GNNs) to count homomorphisms has recently been proposed as a practical and fine-grained measure of their expressive power. Although several existing works have investigated the homomorphism counting…

Machine Learning · Computer Science 2024-10-07 Junru Zhou , Muhan Zhang

This paper presents the Persistent Weisfeiler-Lehman Random walk scheme (abbreviated as PWLR) for graph representations, a novel mathematical framework which produces a collection of explainable low-dimensional representations of graphs…

Machine Learning · Computer Science 2022-08-30 Sun Woo Park , Yun Young Choi , Dosang Joe , U Jin Choi , Youngho Woo

Graph neural networks (GNNs) have recently become the standard approach for learning with graph-structured data. Prior work has shed light into their potential, but also their limitations. Unfortunately, it was shown that standard GNNs are…

Machine Learning · Computer Science 2023-06-12 Gaspard Michel , Giannis Nikolentzos , Johannes Lutzeyer , Michalis Vazirgiannis

A graph $G$ is universal for a class of graphs $\mathcal{C}$, if, up to isomorphism, $G$ contains every graph in $\mathcal{C}$ as a subgraph. In 1978, Chung and Graham asked for the minimal number $s(n)$ of edges in a graph with $n$…

Combinatorics · Mathematics 2026-03-27 Julian Becker , Konstantinos Panagiotou , Matija Pasch

Characterizing the separation power of graph neural networks (GNNs) provides an understanding of their limitations for graph learning tasks. Results regarding separation power are, however, usually geared at specific GNN architectures, and…

Machine Learning · Computer Science 2022-04-12 Floris Geerts , Juan L. Reutter

Link prediction is one important application of graph neural networks (GNNs). Most existing GNNs for link prediction are based on one-dimensional Weisfeiler-Lehman (1-WL) test. 1-WL-GNNs first compute node representations by iteratively…

Machine Learning · Computer Science 2022-06-22 Yang Hu , Xiyuan Wang , Zhouchen Lin , Pan Li , Muhan Zhang

Recently, subgraph GNNs have emerged as an important direction for developing expressive graph neural networks (GNNs). While numerous architectures have been proposed, so far there is still a limited understanding of how various design…

Machine Learning · Computer Science 2023-03-30 Bohang Zhang , Guhao Feng , Yiheng Du , Di He , Liwei Wang

Learning to optimize is a rapidly growing area that aims to solve optimization problems or improve existing optimization algorithms using machine learning (ML). In particular, the graph neural network (GNN) is considered a suitable ML model…

Machine Learning · Computer Science 2023-05-29 Ziang Chen , Jialin Liu , Xinshang Wang , Jianfeng Lu , Wotao Yin

Stars' chemical signatures provide invaluable insights into stellar cluster formation. This study utilized the Weisfeiler-Lehman (WL) Graph Kernel to examine a 15-dimensional elemental abundance space. Through simulating chemical…

Astrophysics of Galaxies · Physics 2023-06-27 Yuan-Sen Ting , Bhavesh Sharma

Subgraph representation learning has been effective in solving various real-world problems. However, current graph neural networks (GNNs) produce suboptimal results for subgraph-level tasks due to their inability to capture complex…

Machine Learning · Computer Science 2025-11-12 Dongkwan Kim , Alice Oh

Let $G$ be a connected graph and $u,v$ and $w$ vertices of $G$. Then $w$ is said to {\em strongly resolve} $u$ and $v$, if there is either a shortest $u$-$w$ path that contains $v$ or a shortest $v$-$w$ path that contains $u$. A set $W$ of…

Combinatorics · Mathematics 2020-08-11 Nadia Benakli , Novi H Bong , Shonda M. Dueck , Linda Eroh , Beth Novick , Ortrud R. Oellermann
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