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Dynamics of flexible molecules are often determined by an interplay between local chemical bond fluctuations and conformational changes driven by long-range electrostatics and van der Waals interactions. This interplay between interactions…

Chemical Physics · Physics 2021-03-05 Valentin Vassilev-Galindo , Gregory Fonseca , Igor Poltavsky , Alexandre Tkatchenko

Molecular dynamics (MD) simulation is essential for various scientific domains but computationally expensive. Learning-based force fields have made significant progress in accelerating ab-initio MD simulation but are not fast enough for…

Machine Learning · Computer Science 2023-08-29 Xiang Fu , Tian Xie , Nathan J. Rebello , Bradley D. Olsen , Tommi Jaakkola

Simulating the time evolution of Partial Differential Equations (PDEs) of large-scale systems is crucial in many scientific and engineering domains such as fluid dynamics, weather forecasting and their inverse optimization problems.…

Machine Learning · Computer Science 2022-10-13 Tailin Wu , Takashi Maruyama , Jure Leskovec

Contemporary Deep Neural Network (DNN) contains millions of synaptic connections with tens to hundreds of layers. The large computation and memory requirements pose a challenge to the hardware design. In this work, we leverage the intrinsic…

Machine Learning · Computer Science 2017-11-07 Jingyang Zhu , Jingbo Jiang , Xizi Chen , Chi-Ying Tsui

Compute In-Memory platforms such as memristive crossbars are gaining focus as they facilitate acceleration of Deep Neural Networks (DNNs) with high area and compute-efficiencies. However, the intrinsic non-idealities associated with the…

Machine Learning · Computer Science 2023-04-18 Abhiroop Bhattacharjee , Abhishek Moitra , Priyadarshini Panda

Variational empirical Bayes (VEB) methods provide a practically attractive approach to fitting large, sparse, multiple regression models. These methods usually use coordinate ascent to optimize the variational objective function, an…

Methodology · Statistics 2024-11-25 Saikat Banerjee , Peter Carbonetto , Matthew Stephens

Sampling from discrete distributions with multiple modes and energy barriers is fundamental to machine learning and computational physics. Recent discrete neural samplers like MDNS suffer from mode collapse and fail to sample high-energy…

The searching procedure of neural architecture search (NAS) is notoriously time consuming and cost prohibitive.To make the search space continuous, most existing gradient-based NAS methods relax the categorical choice of a particular…

Computer Vision and Pattern Recognition · Computer Science 2019-12-11 Shoufa Chen , Yunpeng Chen , Shuicheng Yan , Jiashi Feng

Memory effects are ubiquitous in a wide variety of complex physical phenomena, ranging from glassy dynamics and metamaterials to climate models. The Generalised Langevin Equation (GLE) provides a rigorous way to describe memory effects via…

Disordered Systems and Neural Networks · Physics 2023-06-29 Max Kerr Winter , Ilian Pihlajamaa , Vincent E. Debets , Liesbeth M. C. Janssen

Large-scale molecular dynamics simulations with high accuracy have been increasingly popular for their capability to bridge the gap between atomistic modeling and mesoscale phenomena. Both machine learning potentials and enhanced sampling…

Computational Physics · Physics 2026-03-24 Haoting Zhang , Qiuhan Jia , Zhennan Zhang , Yijie Zhu , Zhongwei Zhang , Junjie Wang , Jiuyang Shi , Zheyong Fan , Jian Sun

Particle accelerators are invaluable discovery engines in the chemical, biological and physical sciences. Characterization of the accelerated beam response to accelerator input parameters is of-ten the first step when conducting…

Accuracy in neural PDE solvers often breaks down not because of limited expressivity, but due to poor optimisation caused by ill-conditioning, especially in multi-fidelity and stiff problems. We study this issue in Physics-Informed Extreme…

Machine Learning · Computer Science 2025-08-11 Siddharth Rout

Physics-informed deep learning often faces optimization challenges due to the complexity of solving partial differential equations (PDEs), which involve exploring large solution spaces, require numerous iterations, and can lead to unstable…

The evolution of quantization and mixed-precision techniques has unlocked new possibilities for enhancing the speed and energy efficiency of NNs. Several recent studies indicate that adapting precision levels across different parameters can…

Machine Learning · Computer Science 2025-09-19 Giorgos Armeniakos , Alexis Maras , Sotirios Xydis , Dimitrios Soudris

Transition state (TS) searches are a critical bottleneck in computational studies of chemical reactivity, as accurately capturing complex phenomena like bond breaking and formation events requires repeated evaluations of expensive ab-initio…

Chemical Physics · Physics 2025-09-23 Jonah Marks , Joseph Gomes

Molecular dynamics simulations can generate atomically detailed trajectories of complex systems, but analyzing these dynamics can be challenging when systems lack well-established quantitative descriptors (features). Graph neural networks…

Machine Learning · Computer Science 2025-12-09 Zihan Pengmei , Spencer C. Guo , Chatipat Lorpaiboon , Aaron R. Dinner

To cope with the ever-increasing computational demand of the DNN execution, recent neural architecture search (NAS) algorithms consider hardware cost metrics into account, such as GPU latency. To further pursue a fast, efficient execution,…

Machine Learning · Computer Science 2021-02-17 Kanghyun Choi , Deokki Hong , Hojae Yoon , Joonsang Yu , Youngsok Kim , Jinho Lee

Autonomous exploration requires robots to generate informative trajectories iteratively. Although sampling-based methods are highly efficient in unmanned aerial vehicle exploration, many of these methods do not effectively utilize the…

Robotics · Computer Science 2021-03-23 Zhefan Xu , Di Deng , Kenji Shimada

The dynamics of complex systems often involve thermally activated barrier crossing events that allow these systems to move from one basin of attraction on the high dimensional energy surface to another. Such events are ubiquitous, but…

Materials Science · Physics 2015-05-30 Amit Samanta , Weinan E

Neural architecture search (NAS) typically consists of three main steps: training a super-network, training and evaluating sampled deep neural networks (DNNs), and training the discovered DNN. Most of the existing efforts speed up some…

Computer Vision and Pattern Recognition · Computer Science 2021-04-02 Tien-Ju Yang , Yi-Lun Liao , Vivienne Sze
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