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Applications such as the analysis of microbiome data have led to renewed interest in statistical methods for compositional data, i.e., multivariate data in the form of probability vectors that contain relative proportions. In particular,…

Methodology · Statistics 2021-09-13 Shiqing Yu , Mathias Drton , Ali Shojaie

Georeferenced compositional data are prominent in many scientific fields and in spatial statistics. This work addresses the problem of proposing models and methods to analyze and predict, through kriging, this type of data. To this purpose,…

Methodology · Statistics 2021-10-18 Lucia Clarotto , Denis Allard , Alessandra Menafoglio

Statistical depth, a useful tool to measure the center-outward rank of multivariate and functional data, is still under-explored in temporal point processes. Recent studies on point process depth proposed a weighted product of two terms -…

Methodology · Statistics 2022-03-10 Xinyu Zhou , Yijia Ma , Wei Wu

Discrete data such as counts of microbiome taxa resulting from next-generation sequencing are routinely encountered in bioinformatics. Taxa count data in microbiome studies are typically high-dimensional, over-dispersed, and can only reveal…

Methodology · Statistics 2022-06-23 Yuan Fang , Sanjeena Subedi

The study of immune cellular composition has been of great scientific interest in immunology because of the generation of multiple large-scale data. From the statistical point of view, such immune cellular data should be treated as…

Applications · Statistics 2022-04-22 Jinkyung Yoo , Zequn Sun , Michael Greenacre , Qin Ma , Dongjun Chung , Young Min Kim

The problem of overdispersion in multivariate count data is a challenging issue. Nowadays, it covers a central role mainly due to the relevance of modern technologies data, such as Next Generation Sequencing and textual data from the web or…

Methodology · Statistics 2025-02-24 Noemi Corsini , Cinzia Viroli

Compositional data and multivariate count data with known totals are challenging to analyse due to the non-negativity and sum-to-one constraints on the sample space. It is often the case that many of the compositional components are highly…

Methodology · Statistics 2020-12-24 Janice L. Scealy , Andrew T. A. Wood

The Dirichlet-multinomial (DM) distribution plays a fundamental role in modern statistical methodology development and application. Recently, the DM distribution and its variants have been used extensively to model multivariate count data…

Methodology · Statistics 2023-02-27 Matthew D. Koslovsky

Compositional data consists of vectors of proportions whose components sum to 1. Such vectors lie in the standard simplex, which is a manifold with boundary. One issue that has been rather controversial within the field of compositional…

Statistics Theory · Mathematics 2019-02-22 Yannis Pantazis , Michail Tsagris , Andrew T. A. Wood

This paper develops methods to study the distribution of Eulerian statistics defined by second-order recurrence relations. We define a random process to decompose the statistics over compositions of integers. It is shown that the numbers of…

Probability · Mathematics 2022-10-20 Alperen Y. Özdemir

In microbiome and genomic studies, the regression of compositional data has been a crucial tool for identifying microbial taxa or genes that are associated with clinical phenotypes. To account for the variation in sequencing depth, the…

Methodology · Statistics 2021-03-11 Pixu Shi , Yuchen Zhou , Anru R. Zhang

When estimating a proportion and only a sample of triplets is given, dependencies within the triplets are to be accounted for. Without assuming a distribution for the success count of the triplet, together with the proportion, as second and…

Methodology · Statistics 2022-03-11 Rafael Weissbach , Eric Scholz

Compositional data find broad application across diverse fields due to their efficacy in representing proportions or percentages of various components within a whole. Spatial dependencies often exist in compositional data, particularly when…

Methodology · Statistics 2024-03-21 Teo Nguyen , Sarat Moka , Kerrie Mengersen , Benoit Liquet

The restricted polynomially-tilted pairwise interaction (RPPI) distribution gives a flexible model for compositional data. It is particularly well-suited to situations where some of the marginal distributions of the components of a…

Methodology · Statistics 2023-05-15 Janice L. Scealy , Kassel L. Hingee , John T. Kent , Andrew T. A. Wood

This article present a method of mutual transformation between count model and composition model. Offer the mathematical view of classical radio and log-radio in compositional data analysis and expand the idea of mixture model of counts…

Statistics Theory · Mathematics 2025-09-12 Guanyi Wu

Overdispersed count data are modelled with likelihood and non-likelihood approaches. Likelihood approaches include the Poisson mixtures with three distributions, the gamma, the lognormal, and the inverse Gaussian distributions.…

Methodology · Statistics 2008-09-08 Stanley Xu , Gary Grunwald , Richard Jones

The prevailing IR-threshold paradigm posits a positive correlation between imbalance ratio (IR) and oversampling effectiveness, yet this assumption remains empirically unsubstantiated through controlled experimentation. We conducted 12…

Machine Learning · Computer Science 2026-04-07 Yuwen Jiang , Songyun Ye

Isotonic distributional regression (IDR) is a powerful nonparametric technique for the estimation of conditional distributions under order restrictions. In a nutshell, IDR learns conditional distributions that are calibrated, and…

Methodology · Statistics 2021-09-29 Alexander Henzi , Johanna F. Ziegel , Tilmann Gneiting

Compositional observations are an increasingly prevalent data source in spatial statistics. Analysis of such data is typically done on log-ratio transformations or via Dirichlet regression. However, these approaches often make unnecessarily…

Methodology · Statistics 2025-05-27 Michael R. Schwob , Mevin B. Hooten , Nicholas M. Calzada , Timothy H. Keitt

Compositional data are met in many different fields, such as economics, archaeometry, ecology, geology and political sciences. Regression where the dependent variable is a composition is usually carried out via a log-ratio transformation of…

Methodology · Statistics 2017-06-08 Michail Tsagris , Connie Stewart
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