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Security vulnerabilities present in a code that has been written in diverse programming languages are among the most critical yet complicated aspects of source code to detect. Static analysis tools based on rule-based patterns usually do…

Cryptography and Security · Computer Science 2025-08-19 Hael Abdulhakim Ali Humran , Ferdi Sonmez

Inferring missing links or detecting spurious ones based on observed graphs, known as link prediction, is a long-standing challenge in graph data analysis. With the recent advances in deep learning, graph neural networks have been used for…

Social and Information Networks · Computer Science 2023-01-03 Xingping Xian , Tao Wu , Xiaoke Ma , Shaojie Qiao , Yabin Shao , Chao Wang , Lin Yuan , Yu Wu

Retrosynthesis prediction is one of the fundamental challenges in organic chemistry and related fields. The goal is to find reactants molecules that can synthesize product molecules. To solve this task, we propose a new graph-to-graph…

Quantitative Methods · Quantitative Biology 2022-04-20 Zaiyun Lin , Shiqiu Yin , Lei Shi , Wenbiao Zhou , YingSheng Zhang

Graph representation learning has emerged as a powerful technique for addressing real-world problems. Various downstream graph learning tasks have benefited from its recent developments, such as node classification, similarity search, and…

Machine Learning · Computer Science 2020-07-03 Jiezhong Qiu , Qibin Chen , Yuxiao Dong , Jing Zhang , Hongxia Yang , Ming Ding , Kuansan Wang , Jie Tang

Program errors can occur in any type of programming, and can manifest in a variety of ways, such as unexpected output, crashes, or performance issues. And program error diagnosis can often be too abstract or technical for developers to…

Software Engineering · Computer Science 2025-01-07 Zhenyu Xu , Victor S. Sheng

In distributed optimization problems, a technique called gradient coding, which involves replicating data points, has been used to mitigate the effect of straggling machines. Recent work has studied approximate gradient coding, which…

Machine Learning · Statistics 2021-08-09 Margalit Glasgow , Mary Wootters

Fraud detection problems are usually formulated as a machine learning problem on a graph. Recently, Graph Neural Networks (GNNs) have shown solid performance on fraud detection. The successes of most previous methods heavily rely on rich…

Machine Learning · Computer Science 2021-10-05 Chen Wang , Yingtong Dou , Min Chen , Jia Chen , Zhiwei Liu , Philip S. Yu

Context: Performance regressions negatively impact execution time and memory usage of software systems. Nevertheless, there is a lack of systematic methods to evaluate the effectiveness of performance test suites. Performance mutation…

The backpropagation of error algorithm used to train deep neural networks has been fundamental to the successes of deep learning. However, it requires sequential backward updates and non-local computations, which make it challenging to…

Neural and Evolutionary Computing · Computer Science 2022-02-22 Beren Millidge , Tommaso Salvatori , Yuhang Song , Rafal Bogacz , Thomas Lukasiewicz

Kernel and linear regression have been recently explored in the prediction of graph signals as the output, given arbitrary input signals that are agnostic to the graph. In many real-world problems, the graph expands over time as new nodes…

Machine Learning · Computer Science 2019-11-27 Arun Venkitaraman , Saikat Chatterjee , Bo Wahlberg

Deep learning is widely used to uncover hidden patterns in large code corpora. To achieve this, constructing a format that captures the relevant characteristics and features of source code is essential. Graph-based representations have…

Software Engineering · Computer Science 2024-02-01 Mootez Saad , Tushar Sharma

Just-in-time defect prediction assigns a defect risk to each new change to a software repository in order to prioritize review and testing efforts. Over the last decades different approaches were proposed in literature to craft more…

Software Engineering · Computer Science 2022-09-29 Peter Bludau , Alexander Pretschner

Deep Learning (DL) models to analyze source code have shown immense promise during the past few years. More recently, self-supervised pre-training has gained traction for learning generic code representations valuable for many downstream SE…

Software Engineering · Computer Science 2023-06-07 Yangruibo Ding , Saikat Chakraborty , Luca Buratti , Saurabh Pujar , Alessandro Morari , Gail Kaiser , Baishakhi Ray

Just-in-Time software defect prediction (JIT-SDP) plays a critical role in prioritizing risky code changes during code review and continuous integration. However, existing datasets often suffer from noisy labels and low precision in…

Software Engineering · Computer Science 2026-04-06 Doha Nam , Taehyoun Kim , Duksan Ryu , Jongmoon Baik

Learning the dependence structure among variables in complex systems is a central problem across medical, natural, and social sciences. These structures can be naturally represented by graphs, and the task of inferring such graphs from data…

Methodology · Statistics 2026-04-02 Lucas Kook , Søren Wengel Mogensen

The way developers edit day-to-day code tends to be repetitive, often using existing code elements. Many researchers have tried to automate repetitive code changes by learning from specific change templates which are applied to limited…

Software Engineering · Computer Science 2022-04-21 Saikat Chakraborty , Yangruibo Ding , Miltiadis Allamanis , Baishakhi Ray

Backpropagation of error (backprop) is a powerful algorithm for training machine learning architectures through end-to-end differentiation. However, backprop is often criticised for lacking biological plausibility. Recently, it has been…

Machine Learning · Computer Science 2020-10-07 Beren Millidge , Alexander Tschantz , Christopher L. Buckley

Professional software developers spend a significant amount of time fixing builds, but this has received little attention as a problem in automatic program repair. We present a new deep learning architecture, called Graph2Diff, for…

Large-scale pre-trained models such as CodeBERT, GraphCodeBERT have earned widespread attention from both academia and industry. Attributed to the superior ability in code representation, they have been further applied in multiple…

Software Engineering · Computer Science 2023-01-24 Shangqing Liu , Bozhi Wu , Xiaofei Xie , Guozhu Meng , Yang Liu

Automated program repair (APR) attempts to generate correct patches and has drawn wide attention from both academia and industry in the past decades. However, APR is continuously struggling with the patch overfitting issue due to the weak…

Software Engineering · Computer Science 2026-04-07 Quanjun Zhang , Haichuan Hu , Chunrong Fang , Ye Shang , Tao Zheng , Zhenyu Chen , Yun Yang , Liang Xiao