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Magnetic Resonance Image (MRI) acquisition is an inherently slow process which has spurred the development of two different acceleration methods: acquiring multiple correlated samples simultaneously (parallel imaging) and acquiring fewer…

Image and Video Processing · Electrical Eng. & Systems 2020-04-01 Anuroop Sriram , Jure Zbontar , Tullie Murrell , C. Lawrence Zitnick , Aaron Defazio , Daniel K. Sodickson

This chapter provides an overview of deep learning techniques for improving the spatial resolution of MRI, ranging from convolutional neural networks, generative adversarial networks, to more advanced models including transformers,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-23 Ziyu Li , Zihan Li , Haoxiang Li , Qiuyun Fan , Karla L. Miller , Wenchuan Wu , Akshay S. Chaudhari , Qiyuan Tian

Diffusion MRI (dMRI) is an advanced imaging technique characterizing tissue microstructure and white matter structural connectivity of the human brain. The demand for high-quality dMRI data is growing, driven by the need for better…

Image and Video Processing · Electrical Eng. & Systems 2024-08-26 Xi Zhu , Wei Zhang , Yijie Li , Lauren J. O'Donnell , Fan Zhang

Current volumetric biomedical foundation models struggle to generalize as public 3D datasets are small and do not cover the broad diversity of medical procedures, conditions, anatomical regions, and imaging protocols. We address this by…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Neel Dey , Benjamin Billot , Hallee E. Wong , Clinton J. Wang , Mengwei Ren , P. Ellen Grant , Adrian V. Dalca , Polina Golland

Insufficiency of training data is a persistent issue in medical image analysis, especially for task-based functional magnetic resonance images (fMRI) with spatio-temporal imaging data acquired using specific cognitive tasks. In this paper,…

Image and Video Processing · Electrical Eng. & Systems 2023-08-31 Jiyao Wang , Nicha C. Dvornek , Lawrence H. Staib , James S. Duncan

Deep learning models in medical contexts face challenges like data scarcity, inhomogeneity, and privacy concerns. This study focuses on improving ventricular segmentation in brain MRI images using synthetic data. We employed two latent…

Computer Vision and Pattern Recognition · Computer Science 2024-11-05 Tim Ruschke , Jonathan Frederik Carlsen , Adam Espe Hansen , Ulrich Lindberg , Amalie Monberg Hindsholm , Martin Norgaard , Claes Nøhr Ladefoged

T2 mapping in fetal brain MRI has the potential to improve characterization of the developing brain, especially at mid-field (0.55T), where T2 decay is slower. However, this is challenging as fetal MRI acquisition relies on multiple…

This work presents a comparative study of existing and new techniques to detect knee injuries by leveraging Stanford's MRNet Dataset. All approaches are based on deep learning and we explore the comparative performances of transfer learning…

Image and Video Processing · Electrical Eng. & Systems 2020-10-06 David Azcona , Kevin McGuinness , Alan F. Smeaton

This study presents an integrated approach for advancing functional Near-Infrared Spectroscopy (fNIRS) neuroimaging through the synthesis of data and application of machine learning models. By addressing the scarcity of high-quality…

Signal Processing · Electrical Eng. & Systems 2024-05-21 Eitan Waks

Self-supervised pretrain techniques have been widely used to improve the downstream tasks' performance. However, real-world magnetic resonance (MR) studies usually consist of different sets of contrasts due to different acquisition…

Image and Video Processing · Electrical Eng. & Systems 2025-06-17 Badhan Kumar Das , Ajay Singh , Gengyan Zhao , Han Liu , Thomas J. Re , Dorin Comaniciu , Eli Gibson , Andreas Maier

The goal of MRI reconstruction is to restore a high fidelity image from partially observed measurements. This partial view naturally induces reconstruction uncertainty that can only be reduced by acquiring additional measurements. In this…

Computer Vision and Pattern Recognition · Computer Science 2019-02-11 Zizhao Zhang , Adriana Romero , Matthew J. Muckley , Pascal Vincent , Lin Yang , Michal Drozdzal

Large-scale supervised pretraining is rapidly reshaping 3D medical image segmentation. However, existing efforts focus primarily on increasing dataset size and overlook the question of whether the backbone network is an effective…

Image and Video Processing · Electrical Eng. & Systems 2025-12-22 Saikat Roy , Yannick Kirchhoff , Constantin Ulrich , Maximillian Rokuss , Tassilo Wald , Fabian Isensee , Klaus Maier-Hein

Automated segmentation of multiple sclerosis (MS) lesions from MRI scans is important to quantify disease progression. In recent years, convolutional neural networks (CNNs) have shown top performance for this task when a large amount of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-10 Jiacheng Wang , Hao Li , Han Liu , Dewei Hu , Daiwei Lu , Keejin Yoon , Kelsey Barter , Francesca Bagnato , Ipek Oguz

Advances in deep learning have led to remarkable success in augmented microscopy, enabling us to obtain high-quality microscope images without using expensive microscopy hardware and sample preparation techniques. However, current deep…

Image and Video Processing · Electrical Eng. & Systems 2020-11-24 Zhengyang Wang , Yaochen Xie , Shuiwang Ji

Magnetic Resonance Imaging (MRI) is a non-invasive diagnostic and radiotherapy (RT) planning tool, offering detailed insights into the anatomy of the human body. The extensive scan time is stressful for patients, who must remain motionless…

Image and Video Processing · Electrical Eng. & Systems 2023-11-23 Shahinur Alam , Jinsoo Uh , Alexander Dresner , Chia-ho Hua , Khaled Khairy

Removing noise from images is a challenging and fundamental problem in the field of computer vision. Images captured by modern cameras are inevitably degraded by noise which limits the accuracy of any quantitative measurements on those…

Computer Vision and Pattern Recognition · Computer Science 2023-07-13 Nikhil Verma , Deepkamal Kaur , Lydia Chau

Ultrahigh field (UHF) Magnetic Resonance Imaging (MRI) offers an elevated signal-to-noise ratio (SNR), enabling exceptionally high spatial resolution that benefits both clinical diagnostics and advanced research. However, the jump to higher…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Zhengyi Lu , Hao Liang , Ming Lu , Xiao Wang , Xinqiang Yan , Yuankai Huo

Ultra-low-field (ULF) MRI offers portable and accessible neuroimaging but suffers from reduced signal-to-noise ratio and limited spatial resolution compared to high-field (HF) systems. Acquiring paired ULF-HF data for supervised enhancement…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Toufiq Musah , Salvatore Calcagno , Federica Proietto Salanitri , Xiaomeng Li , Maruf Adewole , Marawan Elbatel

Purpose: To assess whether breast lesion segmentation can be learned directly from acquired MRI k-space, and whether doing so improves robustness when data are accelerated or noisy. Materials and Methods: This retrospective study used…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Lukas T. Rotkopf , Marco Schlimbach , Julius C. Holzschuh , Heinz-Peter Schlemmer , Jens Kleesiek , Moritz Rempe

Data augmentation is classically used to improve the overall performance of deep learning models. It is, however, challenging in the case of medical applications, and in particular for multiparametric datasets. For example, traditional…

Image and Video Processing · Electrical Eng. & Systems 2023-08-01 Karen Sanchez , Carlos Hinojosa , Kevin Arias , Henry Arguello , Denis Kouame , Olivier Meyrignac , Adrian Basarab