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Related papers: MolBind: Multimodal Alignment of Language, Molecul…

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Recent advancements in computational chemistry have leveraged the power of trans-former-based language models, such as MoLFormer, pre-trained using a vast amount of simplified molecular-input line-entry system (SMILES) sequences, to…

Biomolecules · Quantitative Biology 2024-11-05 Tianhao Peng , Yuchen Li , Xuhong Li , Jiang Bian , Zeke Xie , Ning Sui , Shahid Mumtaz , Yanwu Xu , Linghe Kong , Haoyi Xiong

Multimodal embedding models, built upon causal Vision Language Models (VLMs), have shown promise in various tasks. However, current approaches face three key limitations: the use of causal attention in VLM backbones is suboptimal for…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Haonan Chen , Hong Liu , Yuping Luo , Liang Wang , Nan Yang , Furu Wei , Zhicheng Dou

Cross-modal alignment is a crucial task in multimodal learning aimed at achieving semantic consistency between vision and language. This requires that image-text pairs exhibit similar semantics. Traditional algorithms pursue embedding…

Machine Learning · Computer Science 2026-03-09 Xiang Ma , Lexin Fang , Litian Xu , Caiming Zhang

Multilingual generative models obtain remarkable cross-lingual in-context learning capabilities through pre-training on large-scale corpora. However, they still exhibit a performance bias toward high-resource languages and learn isolated…

Computation and Language · Computer Science 2024-06-13 Chong Li , Shaonan Wang , Jiajun Zhang , Chengqing Zong

Virtual screening (VS) is an essential task in drug discovery, focusing on the identification of small-molecule ligands that bind to specific protein pockets. Existing deep learning methods, from early regression models to recent…

Machine Learning · Computer Science 2025-11-11 Bowei He , Bowen Gao , Yankai Chen , Yanyan Lan , Chen Ma , Philip S. Yu , Ya-Qin Zhang , Wei-Ying Ma

Molecular pretraining, which learns molecular representations over massive unlabeled data, has become a prominent paradigm to solve a variety of tasks in computational chemistry and drug discovery. Recently, prosperous progress has been…

Machine Learning · Computer Science 2022-10-03 Yanqiao Zhu , Dingshuo Chen , Yuanqi Du , Yingze Wang , Qiang Liu , Shu Wu

We propose Domain-Conditioned Meta-Contrastive Learning, a framework for improving the cross-domain generalization of vision-language models. While contrastive models such as CLIP achieve strong performance through large-scale training,…

Optimization and Control · Mathematics 2026-03-31 Merham Fouladvand , Peuroly Batra

Multimodal learning seeks to utilize data from multiple sources to improve the overall performance of downstream tasks. It is desirable for redundancies in the data to make multimodal systems robust to missing or corrupted observations in…

Computer Vision and Pattern Recognition · Computer Science 2024-10-14 Md Kaykobad Reza , Ashley Prater-Bennette , M. Salman Asif

Deep learning in computational biochemistry has traditionally focused on molecular graphs neural representations; however, recent advances in language models highlight how much scientific knowledge is encoded in text. To bridge these two…

Machine Learning · Computer Science 2023-07-26 Romain Lacombe , Andrew Gaut , Jeff He , David Lüdeke , Kateryna Pistunova

Multimodal representation learning aims to construct a shared embedding space in which heterogeneous modalities are semantically aligned. Despite strong empirical results, InfoNCE-based objectives introduce inherent conflicts that yield…

Machine Learning · Computer Science 2026-02-11 Wenzhe Yin , Pan Zhou , Zehao Xiao , Jie Liu , Shujian Yu , Jan-Jakob Sonke , Efstratios Gavves

Clinicians usually combine information from multiple sources to achieve the most accurate diagnosis, and this has sparked increasing interest in leveraging multimodal deep learning for diagnosis. However, in real clinical scenarios, due to…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Kai Han , Chongwen Lyu , Lele Ma , Chengxuan Qian , Siqi Ma , Zheng Pang , Jun Chen , Zhe Liu

Language Models (LMs) have demonstrated impressive molecule understanding ability on various 1D text-related tasks. However, they inherently lack 2D graph perception - a critical ability of human professionals in comprehending molecules'…

Computation and Language · Computer Science 2024-01-19 Zhiyuan Liu , Sihang Li , Yanchen Luo , Hao Fei , Yixin Cao , Kenji Kawaguchi , Xiang Wang , Tat-Seng Chua

Vision-Language Models (VLMs) are typically trained on a diverse set of multi-modal domains, yet current practices rely on costly manual tuning. We propose MaD-Mix, a principled and computationally efficient framework that derives…

Machine Learning · Computer Science 2026-02-10 Wanyun Xie , Francesco Tonin , Volkan Cevher

Computational pathology models that use digitized histopathology whole-slide images have the potential to become a cost-effective and scalable alternative to molecular assays for the prediction of genomic biomarkers, a key task in precision…

Quantitative Methods · Quantitative Biology 2026-03-03 Ekaterina Redekop , Eric Zimmermann , Ava P Amini , Alex X Lu , Neil Tenenholtz , James Brian Hall , Lorin Crawford , Kristen A Severson

Accurate prediction of protein-ligand binding affinities is crucial for drug development. Recent advances in machine learning show promising results on this task. However, these methods typically rely heavily on labeled data, which can be…

Machine Learning · Computer Science 2024-06-13 Meng Liu , Saee Gopal Paliwal

Molecular property prediction aims to learn representations that map chemical structures to functional properties. While multimodal learning has emerged as a powerful paradigm to learn molecular representations, prior works have largely…

Machine Learning · Computer Science 2026-03-03 Feng Jiang , Mangal Prakash , Hehuan Ma , Jianyuan Deng , Yuzhi Guo , Amina Mollaysa , Tommaso Mansi , Rui Liao , Junzhou Huang

Many keypoint detection and description methods have been proposed for image matching or registration. While these methods demonstrate promising performance for single-modality image matching, they often struggle with multimodal data…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Yepeng Liu , Zhichao Sun , Baosheng Yu , Yitian Zhao , Bo Du , Yongchao Xu , Jun Cheng

Recent Vision-Language Pre-trained (VLP) models based on dual encoder have attracted extensive attention from academia and industry due to their superior performance on various cross-modal tasks and high computational efficiency. They…

Computer Vision and Pattern Recognition · Computer Science 2022-10-03 Bin Shan , Weichong Yin , Yu Sun , Hao Tian , Hua Wu , Haifeng Wang

We develop an approach to learning visual representations that embraces multimodal data, driven by a combination of intra- and inter-modal similarity preservation objectives. Unlike existing visual pre-training methods, which solve a proxy…

Computer Vision and Pattern Recognition · Computer Science 2021-04-28 Xin Yuan , Zhe Lin , Jason Kuen , Jianming Zhang , Yilin Wang , Michael Maire , Ajinkya Kale , Baldo Faieta

This paper considers self-supervised cross-modal coordination as a strategy enabling utilization of multiple modalities and large volumes of unlabeled plankton data to build models for plankton recognition. Automated imaging instruments…

Computer Vision and Pattern Recognition · Computer Science 2026-04-20 Joona Kareinen , Veikka Immonen , Tuomas Eerola , Lumi Haraguchi , Lasse Lensu , Kaisa Kraft , Sanna Suikkanen , Heikki Kälviäinen
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