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Significant progress has been made recently in the automation and standardization of ab initio point defect calculations. However, the task of developing, implementing, and benchmarking charge corrections for density functional theory (DFT)…

Materials Science · Physics 2019-04-29 Kyle Bystrom , Danny Broberg , Shyam Dwaraknath , Kristin A. Persson , Mark Asta

Functional materials that enable many technological applications in our everyday lives owe their unique properties to defects that are carefully engineered and incorporated into these materials during processing. However, optimizing and…

Materials Science · Physics 2023-03-23 Sokseiha Muy , Conrad Johnston , Nicola Marzari

Traditional defect prediction approaches often use metrics that measure the complexity of the design or implementing code of a software system, such as the number of lines of code in a source file. In this paper, we explore a different…

Software Engineering · Computer Science 2024-09-30 Hung Viet Pham , Tung Thanh Nguyen

The thermoelectric performance of materials exhibits complex nonlinear dependencies on both elemental types and their proportions, rendering traditional trial-and-error approaches inefficient and time-consuming for material discovery. In…

Materials Science · Physics 2025-04-14 Yuxuan Zeng , Wenhao Xie , Wei Cao , Tan Peng , Yue Hou , Ziyu Wang , Jing Shi

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

Rapid solidification leads to unique microstructural features, where a less studied topic is the formation of various crystalline defects, including high dislocation densities, as well as gradients and splitting of the crystalline…

An overview of the Conquest linear scaling density functional theory (DFT) code is given, focussing particularly on the scaling behaviour on modern high- performance computing (HPC) platforms. We demonstrate that essentially perfect linear…

Materials Science · Physics 2010-02-03 D. R. Bowler , T. Miyazaki

Predicting the number of defects in a project is critical for project test managers to allocate budget, resources, and schedule for testing, support and maintenance efforts. Software Defect Prediction models predict the number of defects in…

Software Engineering · Computer Science 2023-06-16 Susmita Haldar , Luiz Fernando Capretz

Defect prediction has been a popular research topic where machine learning (ML) and deep learning (DL) have found numerous applications. However, these ML/DL-based defect prediction models are often limited by the quality and size of their…

Software Engineering · Computer Science 2023-07-26 Parvez Mahbub , Ohiduzzaman Shuvo , Mohammad Masudur Rahman

Usually, it is the software manufacturer who employs verification or testing to ensure that the software embedded in a device meets its main objectives. However, these days we are confronted with the situation that economical or…

Logic in Computer Science · Computer Science 2017-02-16 Pedro R. D'Argenio , Gilles Barthe , Sebastian Biewer , Bernd Finkbeiner , Holger Hermanns

Exploration of structure-property relationships as a function of dopant concentration is commonly based on mean field theories for solid solutions. However, such theories that work well for semiconductors tend to fail in materials with…

CdTe and its alloy CdTeSe are widely used in optoelectronic devices, such as radiation detectors and solar cells, due to their superior electrical properties. However, the formation of defects and defect complexes in these materials can…

Materials Science · Physics 2024-08-29 Xiaofeng Xiang , Yijun Tong , Aaron Gehrke , Scott Dunham

Molecular dynamics (MD) simulations play a crucial role in resolving the underlying conformational dynamics of molecular systems. However, their capability to correctly reproduce and predict dynamics in agreement with experiments is limited…

Chemical Physics · Physics 2025-05-19 Ivan Gilardoni , Valerio Piomponi , Thorben Fröhlking , Giovanni Bussi

Survival of IT industries depends much upon the development of high quality and customer satisfied software products. Quality however can be viewed from various perspectives such as deployment of the products within estimated resources,…

Software Engineering · Computer Science 2014-02-03 Rashmi N , Suma V

Just-in-time compilation provides significant performance improvements for programs written in dynamic languages. These benefits come from the ability of the compiler to speculate about likely cases and generate optimized code for these.…

Programming Languages · Computer Science 2022-04-06 Olivier Flückiger , Jan Ječmen , Sebastián Krynski , Jan Vitek

The freud Python package is a powerful library for analyzing simulation data. Written with modern simulation and data analysis workflows in mind, freud provides a Python interface to fast, parallelized C++ routines that run efficiently on…

To date, computational methods for modeling defects (vacancies, adsorbates, etc.) rely on periodic supercells in which the defect is far enough from its repeated image such that they can be assumed non-interacting. Yet, the relative…

Defect inspection is paramount within the closed-loop manufacturing system. However, existing datasets for defect inspection often lack precision and semantic granularity required for practical applications. In this paper, we introduce the…

Computer Vision and Pattern Recognition · Computer Science 2024-07-22 Shuai Yang , Zhifei Chen , Pengguang Chen , Xi Fang , Yixun Liang , Shu Liu , Yingcong Chen

Many tools exist for extracting structural and physiochemical descriptors from linear peptides to predict their properties, but similar tools for hydrocarbon-stapled peptides are lacking.Here, we present StaPep, a Python-based toolkit…

Biomolecules · Quantitative Biology 2024-02-29 Zhe Wang , Jianping Wu , Mengjun Zheng , Chenchen Geng , Borui Zhen , Wei Zhang , Hui Wu , Zhengyang Xu , Gang Xu , Si Chen , Xiang Li

The density functional theory (DFT) is used in a study of point defects on both UN (001) surface and sub-surface layers. We compare results for slabs of different thicknesses (both perfect and containing nitrogen or uranium vacancies) with…

Materials Science · Physics 2012-11-27 Dmitry Bocharov , Denis Gryaznov , Yuri F. Zhukovskii , Eugene A. Kotomin