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Understanding how species are distributed across landscapes over time is a fundamental question in biodiversity research. Unfortunately, most species distribution models only target a single species at a time, despite strong ecological…

Machine Learning · Computer Science 2017-02-22 Di Chen , Yexiang Xue , Shuo Chen , Daniel Fink , Carla Gomes

In fisheries ecology, species abundance data are often collected by multiple surveys, each with unique characteristics. This article is motivated by a dataset of Atlantic sea scallop abundance records along the northeast coast of the United…

Applications · Statistics 2026-04-03 Quan Vu , Francis K. C. Hui , A. H. Welsh , Samuel Muller , Eva Cantoni , Christopher R. Haak

Recent advances in deep learning have pushed the performances of visual saliency models way further than it has ever been. Numerous models in the literature present new ways to design neural networks, to arrange gaze pattern data, or to…

Computer Vision and Pattern Recognition · Computer Science 2019-07-05 Alexandre Bruckert , Hamed R. Tavakoli , Zhi Liu , Marc Christie , Olivier Le Meur

Presence-only data, point locations where a species has been recorded as being present, are often used in modeling the distribution of a species as a function of a set of explanatory variables---whether to map species occurrence, to…

Applications · Statistics 2010-11-16 David I. Warton , Leah C. Shepherd

The rapid expansion of citizen science initiatives has led to a significant growth of biodiversity databases, and particularly presence-only (PO) observations. PO data are invaluable for understanding species distributions and their…

Machine Learning · Computer Science 2026-01-14 Maxime Ryckewaert , Diego Marcos , Christophe Botella , Maximilien Servajean , Pierre Bonnet , Alexis Joly

Training of deep neural networks heavily depends on the data distribution. In particular, the networks easily suffer from class imbalance. The trained networks would recognize the frequent classes better than the infrequent classes. To…

Computer Vision and Pattern Recognition · Computer Science 2020-03-12 Byungju Kim , Junmo Kim

Class imbalance remains a significant challenge in machine learning, particularly for tabular data classification tasks. While Gradient Boosting Decision Trees (GBDT) models have proven highly effective for such tasks, their performance can…

Machine Learning · Computer Science 2024-07-22 Jiaqi Luo , Yuan Yuan , Shixin Xu

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

Presence-only records may provide data on the distributions of rare species, but commonly suffer from large, unknown biases due to their typically haphazard collection schemes. Presence-absence or count data collected in systematic, planned…

Applications · Statistics 2014-08-08 William Fithian , Jane Elith , Trevor Hastie , David A. Keith

Improving the classification of multi-class imbalanced data is more difficult than its two-class counterpart. In this paper, we use deep neural networks to train new representations of tabular multi-class data. Unlike the typically…

Machine Learning · Computer Science 2023-12-19 Damian Horna , Lango Mateusz , Jerzy Stefanowski

To address the trade-off problem of quality-diversity for the generated images in imbalanced classification tasks, we research on over-sampling based methods at the feature level instead of the data level and focus on searching the latent…

Computer Vision and Pattern Recognition · Computer Science 2022-07-27 Yudi Zhao , Kuangrong Hao , Chaochen Gu , Bing Wei

The difficulty of monitoring biodiversity at fine scales and over large areas limits ecological knowledge and conservation efforts. To fill this gap, Species Distribution Models (SDMs) predict species across space from spatially explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Lukas Picek , Christophe Botella , Maximilien Servajean , César Leblanc , Rémi Palard , Théo Larcher , Benjamin Deneu , Diego Marcos , Pierre Bonnet , Alexis Joly

Intelligent diagnosis method based on data-driven and deep learning is an attractive and meaningful field in recent years. However, in practical application scenarios, the imbalance of time-series fault is an urgent problem to be solved.…

Machine Learning · Computer Science 2021-07-15 Xingtai Gui , Jiyang Zhang

Accurately predicting the geographic ranges of species is crucial for assisting conservation efforts. Traditionally, range maps were manually created by experts. However, species distribution models (SDMs) and, more recently, deep…

Quantitative Methods · Quantitative Biology 2024-08-29 Filip Dorm , Christian Lange , Scott Loarie , Oisin Mac Aodha

Automated analysis of tissue sections allows a better understanding of disease biology and may reveal biomarkers that could guide prognosis or treatment selection. In digital pathology, less abundant cell types can be of biological…

Image and Video Processing · Electrical Eng. & Systems 2021-02-24 Yeman Brhane Hagos , Catherine SY Lecat , Dominic Patel , Lydia Lee , Thien-An Tran , Manuel Rodriguez- Justo , Kwee Yong , Yinyin Yuan

1. Joint species distribution models (JSDMs) have gained considerable traction among ecologists over the past decade, due to their capacity to answer a wide range of questions at both the species- and the community-level. The family of…

Methodology · Statistics 2024-03-19 Pekka Korhonen , Francis K. C. Hui , Jenni Niku , Sara Taskinen , Bert van der Veen

Due to their flexibility and predictive performance, machine-learning based regression methods have become an important tool for predictive modeling and forecasting. However, most methods focus on estimating the conditional mean or specific…

Machine Learning · Statistics 2019-03-15 Rui Li , Howard D. Bondell , Brian J. Reich

Class imbalance in deep neural networks (DNNs) has witnessed a rapid increase in research attention in recent years. However, the varying accounts of the reasons behind the poor performance of DNN on imbalance data in pertinent literature…

Machine Learning · Computer Science 2026-05-26 Ismail B. Mustapha , Shafaatunnur Hasan , Sunday O. Olatunji , Hatem S. Y. Nabus

Many scientific and engineering problems require accurate models of dynamical systems with rare and extreme events. Such problems present a challenging task for data-driven modelling, with many naive machine learning methods failing to…

Machine Learning · Computer Science 2021-12-03 Samuel Rudy , Themistoklis Sapsis

Deep Learning methods have significantly advanced various data-driven tasks such as regression, classification, and forecasting. However, much of this progress has been predicated on the strong but often unrealistic assumption that training…

Machine Learning · Computer Science 2023-10-12 Josias Moukpe