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Data consisting of a graph with a function mapping into $\mathbb{R}^d$ arise in many data applications, encompassing structures such as Reeb graphs, geometric graphs, and knot embeddings. As such, the ability to compare and cluster such…

Computational Geometry · Computer Science 2025-07-17 Erin W. Chambers , Elizabeth Munch , Sarah Percival , Bei Wang

Persistent homology is a way of determining the topological properties of a data set. It is well known that each persistence module admits the structure of a representation of a finite totally ordered set. In previous work, the authors…

Algebraic Topology · Mathematics 2017-11-01 Killian Meehan , David Meyer

We study the problem of how well a tree metric is able to preserve the sum of pairwise distances of an arbitrary metric. This problem is closely related to low-stretch metric embeddings and is interesting by its own flavor from the line of…

Data Structures and Algorithms · Computer Science 2013-01-16 Mong-Jen Kao , Der-Tsai Lee , Dorothea Wagner

The minimum-cost arborescence problem is a well-studied problem in the area of graph theory, with known polynomial-time algorithms for solving it. Previous literature introduced new variations on the original problem with different…

Optimization and Control · Mathematics 2023-05-15 Xiaochen Chou , Mauro Dell'Amico , Jafar Jamal , Roberto Montemanni

The relationship between the complexity classes P and NP is a question that has not yet been answered by the Theory of Computation. The existence of a language in NP, proven not to belong to P, is sufficient evidence to establish the…

Computational Complexity · Computer Science 2014-07-08 Frank Vega Delgado

This short note establishes explicit and broadly applicable relationships between persistence-based distances computed locally and globally. In particular, we show that the bottleneck distance between two zigzag persistence modules…

Algebraic Topology · Mathematics 2019-03-21 Ellen Gasparovic , Maria Gommel , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

We introduce persistence with an emphasis on its algebraic foundations, using the representation theory of posets. Linear representations of posets arise in several areas of mathematics, including the representation theory of quivers and…

Algebraic Topology · Mathematics 2026-04-09 Ulrich Bauer , Thomas Brüstle , Luis Scoccola

The interleaving distance is a key tool for comparing merge trees, which provide topological summaries of scalar functions. In this work, we define an average merge tree for a pair of merge trees using the interleaving distance. Since such…

Computational Geometry · Computer Science 2026-03-03 Elena Farahbakhsh Touli , Ingrid Hotz , Talha Bin Masood

Maximum parsimony distance is a measure used to quantify the dissimilarity of two unrooted phylogenetic trees. It is NP-hard to compute, and very few positive algorithmic results are known due to its complex combinatorial structure. Here we…

Data Structures and Algorithms · Computer Science 2020-04-07 Mark Jones , Steven Kelk , Leen Stougie

We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…

Data Structures and Algorithms · Computer Science 2026-04-01 Tom-Lukas Breitkopf , Vincent Froese , Anton Herrmann , André Nichterlein , Camille Richer

We establish tight bi-Lipschitz bounds certifying quasi-universality (universality up to a constant factor) for various distances between Reeb graphs: the interleaving distance, the functional distortion distance, and the functional…

Geometric Topology · Mathematics 2023-09-14 Ulrich Bauer , Håvard Bakke Bjerkevik , Benedikt Fluhr

In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…

Algebraic Topology · Mathematics 2023-12-08 Håvard Bakke Bjerkevik , Michael Kerber

The interleaving distance, although originally developed for persistent homology, has been generalized to measure the distance between functors modeled on many posets or even small categories. Existing theories require that such a poset…

Category Theory · Mathematics 2020-04-30 Magnus Bakke Botnan , Justin Curry , Elizabeth Munch

The problem of Distance Edge Labeling is a variant of Distance Vertex Labeling (also known as $L_{2,1}$ labeling) that has been studied for more than twenty years and has many applications, such as frequency assignment. The Distance Edge…

Discrete Mathematics · Computer Science 2022-03-17 Dušan Knop , Tomáš Masařík

We study complexity of rearrangement problems in the generalized breakpoint model and settle several open questions. The model was introduced by Tannier et al. (2009) who showed that the median problem is solvable in polynomial time in the…

Discrete Mathematics · Computer Science 2013-01-11 Jakub Kovac

An added edge to a graph is called an inset edge. Predicting k inset edges which minimize the average distance of a graph is known to be NP-Hard. However, when k = 1 the complexity of the problem is polynomial. In this paper, some tools for…

Computational Complexity · Computer Science 2020-08-14 M. H. Khalifeh , A. -H. Esfahanian

An important problem in the field of Topological Data Analysis is defining topological summaries which can be combined with traditional data analytic tools. In recent work Bubenik introduced the persistence landscape, a stable…

Algebraic Topology · Mathematics 2018-12-27 Oliver Vipond

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

The concept of edit distance, which dates back to the 1960s in the context of comparing word strings, has since found numerous applications with various adaptations in computer science, computational biology, and applied topology. By…

Algebraic Topology · Mathematics 2026-04-22 Woojin Kim , Won Seong

In the well-known complexity class NP are combinatorial problems, whose optimization counterparts are important for many practical settings. These problems typically consider full knowledge about the input. In practical settings, however,…

Computational Complexity · Computer Science 2025-11-24 Christoph Grüne