Related papers: Optimal Bounds for Distinct Quartics
In 1946, Erd\H{o}s posed the distinct distance problem, which seeks to find the minimum number of distinct distances between pairs of points selected from any configuration of $n$ points in the plane. The problem has since been explored…
We investigate quantum algorithms for classification, a fundamental problem in machine learning, with provable guarantees. Given $n$ $d$-dimensional data points, the state-of-the-art (and optimal) classical algorithm for training…
In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…
Fractional superstrings are recently-proposed generalizations of the traditional superstrings and heterotic strings. They have critical spacetime dimensions which are less than ten, and in this paper we investigate model-building for the…
Palindromes are strings that read the same forward and backward. Problems of computing palindromic structures in strings have been studied for many years with a motivation of their application to biology. The longest palindrome problem is…
A longest repeat query on a string, motivated by its applications in many subfields including computational biology, asks for the longest repetitive substring(s) covering a particular string position (point query). In this paper, we extend…
Fractional repetition (FR) codes is a family of codes for distributed storage systems (DSS) that allow uncoded exact repairs with minimum repair bandwidth. In this work, we consider a bound on the maximum amount of data that can be stored…
In the past thirty years, numerous algorithms for building the suffix array of a string have been proposed. In 2021, the notion of suffix array was extended from strings to DFAs, and it was shown that the resulting data structure can be…
Improved upper and lower bounds on the number of square-free ternary words are obtained. The upper bound is based on the enumeration of square-free ternary words up to length 110. The lower bound is derived by constructing generalised…
We obtain new lower and upper bounds for the maximum multiplicity of some weighted and, respectively, non-weighted common geometric graphs drawn on n points in the plane in general position (with no three points collinear): perfect…
Given a pattern $P$ and a text $T$, both strings over a binary alphabet, the binary jumbled string matching problem consists in telling whether any permutation of $P$ occurs in $T$. The indexed version of this problem, i.e., preprocessing a…
Planar point sets with many triple lines (which contain at least three distinct points of the set) have been studied for 180 years, started with Jackson and followed by Sylvester. Green and Tao has shown recently that the maximum possible…
This paper will analyze several quadratic-time solvable problems, and will classify them into two classes: problems that are solvable in truly subquadratic time (that is, in time $O(n^{2-\epsilon})$ for some $\epsilon>0$) and problems that…
Finding an Approximate Longest Common Substring (ALCS) within a given set $S=\{s_1,s_2,\ldots,s_m\}$ of $m \ge 2$ strings is a key problem in computational biology, such as identifying related mutations across multiple genetic sequences. We…
The edit distance of two strings is the minimum number of insertions, deletions, and substitutions needed to transform one string into the other. The textbook algorithm determines the edit distance of length-$n$ strings in $O(n^2)$ time,…
Longest common substring (LCS), longest palindrome substring (LPS), and Ulam distance (UL) are three fundamental string problems that can be classically solved in near linear time. In this work, we present sublinear time quantum algorithms…
We consider the problem of estimating the value of MAX-CUT in a graph in the streaming model of computation. At one extreme, there is a trivial $2$-approximation for this problem that uses only $O(\log n)$ space, namely, count the number of…
We revisit the so-called "Three Squares Lemma" by Crochemore and Rytter [Algorithmica 1995] and, using arguments based on Lyndon words, derive a more general variant which considers three overlapping squares which do not necessarily share a…
The study of structural graph width parameters like tree-width, clique-width and rank-width has been ongoing during the last five decades, and their algorithmic use has also been increasing [Cygan et al., 2015]. New width parameters…
We say a string has a cadence if a certain character is repeated at regular intervals, possibly with intervening occurrences of that character. We call the cadence anchored if the first interval must be the same length as the others. We…