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Deep Learning has made a great progress for these years. However, it is still difficult to master the implement of various models because different researchers may release their code based on different frameworks or interfaces. In this…

Software Engineering · Computer Science 2017-07-28 Ting Pan

Large tree structures are ubiquitous and real-world relational datasets often have information associated with nodes (e.g., labels or other attributes) and edges (e.g., weights or distances) that need to be communicated to the viewers. Yet,…

Computational Geometry · Computer Science 2023-05-18 Kathryn Gray , Mingwei Li , Reyan Ahmed , Md. Khaledur Rahman , Ariful Azad , Stephen Kobourov , Katy Börner

This chapter summarizes several approaches combining theory, simulation and experiment that aim for a better understanding of phenomena in lipid bilayers and membrane protein systems, covering topics such as lipid rafts, membrane mediated…

Biological Physics · Physics 2014-12-17 Markus Deserno , Kurt Kremer , Harald Paulsen , Christine Peter , Friederike Schmid

There is significant interest in using existing repositories of biological entities, relationships, and models to automate biological model assembly and extension. Current methods aggregate human-curated biological information into…

Molecular Networks · Quantitative Biology 2023-01-30 Adam A. Butchy , Cheryl A. Telmer , Natasa Miskov-Zivanov

This paper describes a first step towards the definition of an abstract machine for linguistic formalisms that are based on typed feature structures, such as HPSG. The core design of the abstract machine is given in detail, including the…

cmp-lg · Computer Science 2008-02-03 Shuly Wintner , Nissim Francez

Many biological and medical tasks require the delineation of 3D curvilinear structures such as blood vessels and neurites from image volumes. This is typically done using neural networks trained by minimizing voxel-wise loss functions that…

Computer Vision and Pattern Recognition · Computer Science 2022-12-27 Doruk Oner , Hussein Osman , Mateusz Kozinski , Pascal Fua

We propose to investigate detecting and characterizing the 3D planar articulation of objects from ordinary videos. While seemingly easy for humans, this problem poses many challenges for computers. We propose to approach this problem by…

Computer Vision and Pattern Recognition · Computer Science 2022-03-31 Shengyi Qian , Linyi Jin , Chris Rockwell , Siyi Chen , David F. Fouhey

We introduce ProcGen3D, a new approach for 3D content creation by generating procedural graph abstractions of 3D objects, which can then be decoded into rich, complex 3D assets. Inspired by the prevalent use of procedural generators in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Xinyi Zhang , Daoyi Gao , Naiqi Li , Angela Dai

The diffusion of minimally invasive, endovascular interventions motivates the development of visualization methods for complex vascular networks. We propose a planar representation of blood vessel trees which preserves the properties that…

Image and Video Processing · Electrical Eng. & Systems 2025-10-23 Guillaume Houry , Tom Boeken , Stéphanie Allassonnière , Jean Feydy

Exponential growth in the quantity of digital news, social media, and other textual sources makes it difficult for humans to keep up with rapidly evolving narratives about world events. Various visualisation techniques have been touted to…

Human-Computer Interaction · Computer Science 2026-03-04 Songhai Fan , Simon Angus , Tim Dwyer , Ying Yang , Sarah Goodwin , Helen Purchase

Knowledge workers such as healthcare information professionals, legal researchers, and librarians need to create and execute search strategies that are comprehensive, transparent, and reproducible. The traditional solution is to use…

Information Retrieval · Computer Science 2022-05-10 Tanja Svarre , Tony Russell-Rose

Composite visualization is a popular design strategy that represents complex datasets by integrating multiple visualizations in a meaningful and aesthetic layout, such as juxtaposition, overlay, and nesting. With this strategy, numerous…

Human-Computer Interaction · Computer Science 2022-11-04 Dazhen Deng , Weiwei Cui , Xiyu Meng , Mengye Xu , Yu Liao , Haidong Zhang , Yingcai Wu

The paper proposes a text-mining based analytical framework aiming at the cognitive organization of complex scientific discourses. The approach is based on models recently developed in science mapping, being a generalization of the…

Digital Libraries · Computer Science 2015-04-23 Sandor Soos

Originally designed to model text, topic modeling has become a powerful tool for uncovering latent structure in domains including medicine, finance, and vision. The goals for the model vary depending on the application: in some cases, the…

Machine Learning · Statistics 2014-11-24 Finale Doshi-Velez , Byron Wallace , Ryan Adams

The automation of user interface development has the potential to accelerate software delivery by mitigating intensive manual implementation. Despite the advancements in Large Multimodal Models for design-to-code translation, existing…

Information Retrieval · Computer Science 2025-12-24 Xian Wu , Ming Zhang , Zhiyu Fang , Fei Li , Bin Wang , Yong Jiang , Hao Zhou

Accurate 3D shape abstraction from a single 2D image is a long-standing problem in computer vision and graphics. By leveraging a set of primitives to represent the target shape, recent methods have achieved promising results. However, these…

Computer Vision and Pattern Recognition · Computer Science 2023-10-05 Di Liu , Xiang Yu , Meng Ye , Qilong Zhangli , Zhuowei Li , Zhixing Zhang , Dimitris N. Metaxas

Recent advances in 3D imaging technologies provide novel insights to researchers and reveal finer and more detail of examined specimen, especially in the biomedical domain, but also impose huge challenges regarding scalability for automated…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Dominik Drees , Aaron Scherzinger , René Hägerling , Friedemann Kiefer , Xiaoyi Jiang

We investigate ways in which to improve the interpretability of LDA topic models by better analyzing and visualizing their outputs. We focus on examining what we refer to as topic similarity networks: graphs in which nodes represent latent…

Computation and Language · Computer Science 2014-09-29 Arun S. Maiya , Robert M. Rolfe

Image-guided object assembly represents a burgeoning research topic in computer vision. This paper introduces a novel task: translating multi-view images of a structural 3D model (for example, one constructed with building blocks drawn from…

Computer Vision and Pattern Recognition · Computer Science 2024-04-26 Hongyu Yan , Yadong Mu

Scientific visualization pipelines encode domain-specific procedural knowledge with strict execution dependencies, making their construction sensitive to missing stages, incorrect operator usage, or improper ordering. Thus, generating…

Graphics · Computer Science 2026-03-30 Guanghui Zhao , Zhe Wang , Yu Dong , Guan Li , GuiHua Shan
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